RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PCDHB5Q9Y5E4 795 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 YJEFN3A6XGL0 299 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 E7ENQ6 273 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 TUBBP07437 444 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 KRT10P13645 584 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 HDAC4P56524 1084 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 COPS2P61201 443 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 PPIGQ13427 754 aaKnown RBP eCLIP21.47■■□□□ 1.032e-7■□□□□ 8.5
TRIM4-202ENST00000354241 PRSS55Q6UWB4 352 aaPredicted RBP21.47■■□□□ 1.03
TRIM4-202ENST00000354241 CMTR2Q8IYT2 770 aaKnown RBP21.47■■□□□ 1.03
TRIM4-202ENST00000354241 KCTD6Q8NC69 237 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 FUBP3Q96I24 572 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRIM4-202ENST00000354241 ZNF558Q96NG5 402 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 NCAPGQ9BPX3 1015 aa21.47■■□□□ 1.03
TRIM4-202ENST00000354241 C11orf84Q9BUA3 381 aaPredicted RBP21.47■■□□□ 1.03
TRIM4-202ENST00000354241 CAPN9O14815 690 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 KDELR1P24390 212 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 MCM3P25205 808 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 NOS2P35228 1153 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 CLCN6P51797 869 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 FPGSQ05932 587 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 IFRD2Q12894 506 aaPredicted RBP21.46■■□□□ 1.03
TRIM4-202ENST00000354241 BRD3Q15059 726 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 USP41Q3LFD5 358 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 TFDP3Q5H9I0 405 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 C16orf59Q7L2K0 433 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 SLC2A13Q96QE2 648 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 YME1L1Q96TA2 773 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 ADAM33Q9BZ11 813 aa21.46■■□□□ 1.03
TRIM4-202ENST00000354241 MRPL42Q9Y6G3 142 aaKnown RBP21.46■■□□□ 1.03
TRIM4-202ENST00000354241 FGBP02675 491 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CHRNA3P32297 505 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CDKN2BP42772 138 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 ATXN1P54253 815 aaKnown RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 SLC25A52Q3SY17 297 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 RSPO2Q6UXX9 243 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CYP4V2Q6ZWL3 525 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 MAATS1Q7Z4T9 603 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 C7orf61Q8IZ16 206 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 C1orf54Q8WWF1 131 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CENPIQ92674 756 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 STAP1Q9ULZ2 295 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 NAALADL1Q9UQQ1 740 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 MYO16Q9Y6X6 1858 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 hCG_1818297A0A087WSY0 165 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 C3orf70A6NLC5 250 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 TTI1O43156 1089 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 LTFP02788 710 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 SLC5A3P53794 718 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 GUCY2DQ02846 1103 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 KLF1Q13351 362 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CYP1B1Q16678 543 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 SYPL2Q5VXT5 272 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 VSTM1Q6UX27 236 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 ATAD1Q8NBU5 361 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 SCAMP5Q8TAC9 235 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 RIN2Q8WYP3 895 aaPredicted RBP21.45■■□□□ 1.02
TRIM4-202ENST00000354241 IRGQQ8WZA9 623 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 RUBCNQ92622 972 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 VN1R3Q9BXE9 311 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 CHST7Q9NS84 486 aa21.45■■□□□ 1.02
TRIM4-202ENST00000354241 KIAA1671Q9BY89 1806 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 TBC1D4O60343 1298 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 CD48P09326 243 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 LAG3P18627 525 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 PTPN7P35236 360 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 GPR15P49685 360 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 PM20D1Q6GTS8 502 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 KIAA1841Q6NSI8 718 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 CCDC137Q6PK04 289 aaKnown RBP21.44■■□□□ 1.02
TRIM4-202ENST00000354241 STRADAQ7RTN6 431 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 BHLHA9Q7RTU4 235 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 COLGALT1Q8NBJ5 622 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 CMASQ8NFW8 434 aaPredicted RBP21.44■■□□□ 1.02
TRIM4-202ENST00000354241 TMEM169Q96HH4 297 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 EPB41L5Q9HCM4 733 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.44■■□□□ 1.02
TRIM4-202ENST00000354241 GPATCH2LQ9NWQ4 482 aa21.44■■□□□ 1.02
TRIM4-202ENST00000354241 SYNJ2BP-COX16A0A087WUM0 186 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 ZSCAN5CA6NGD5 496 aaPredicted RBP21.43■■□□□ 1.02
TRIM4-202ENST00000354241 TRIM66O15016 1216 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 ERLIN1O75477 346 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 TJP3O95049 919 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 EFEMP2O95967 443 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 COILP38432 576 aaPredicted RBP21.43■■□□□ 1.02
TRIM4-202ENST00000354241 CDH6P55285 790 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 PITX1P78337 314 aaPredicted RBP21.43■■□□□ 1.02
TRIM4-202ENST00000354241 DR1Q01658 176 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 ADCY2Q08462 1091 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 GPR17Q13304 367 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 SNX1Q13596 522 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 DDR2Q16832 855 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 KCTD19Q17RG1 926 aaPredicted RBP21.43■■□□□ 1.02
TRIM4-202ENST00000354241 BOLA3Q53S33 107 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 SDHAF4Q5VUM1 108 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 TTC27Q6P3X3 843 aa21.43■■□□□ 1.02
TRIM4-202ENST00000354241 SLC39A11Q8N1S5 342 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms