RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MCTP2Q6DN12 878 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PXKQ7Z7A4 578 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TMEFF1Q8IYR6 380 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 STK11IPQ8N1F8 1099 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PSD4Q8NDX1 1056 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CASKIN2Q8WXE0 1202 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SNX21Q969T3 373 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 APOPT1Q96IL0 206 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CLIC6Q96NY7 704 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM209Q96SK2 561 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SLF1Q9BQI6 1058 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 G6PC2Q9NQR9 355 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 HESX1Q9UBX0 185 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SLC13A4Q9UKG4 626 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RAB21Q9UL25 225 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PLEKHM1Q9Y4G2 1056 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SNX14Q9Y5W7 946 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CYP46A1Q9Y6A2 500 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 IRS2Q9Y4H2 1338 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PNMA6EA0A0J9YXQ4 647 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 OR14I1A6ND48 311 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 DDX58O95786 925 aaKnown RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ACP5P13686 325 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 IL2RBP14784 551 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 EDN2P20800 178 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MLH1P40692 756 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 AARSP49588 968 aaKnown RBP eCLIP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 KRTAP10-2P60368 255 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 NSUN2Q08J23 767 aaKnown RBP eCLIP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MYO1EQ12965 1108 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 NR1I3Q14994 352 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ASIC2Q16515 512 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF750Q32MQ0 723 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SLC44A4Q53GD3 710 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 FAM47AQ5JRC9 791 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CFAP58Q5T655 872 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 OTUD7BQ6GQQ9 843 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 GRHL2Q6ISB3 625 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MFSD5Q6N075 450 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM108Q6UXF1 575 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 DSTYKQ6XUX3 929 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 DPY19L3Q6ZPD9 716 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 C1QL4Q86Z23 238 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SIAH1Q8IUQ4 282 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RHOT2Q8IXI1 618 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 YAF2Q8IY57 180 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 COLGALT2Q8IYK4 626 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 IPCEF1Q8WWN9 437 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RFFLQ8WZ73 363 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 WDFY2Q96P53 400 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ASB2Q96Q27 587 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PPP1R9BQ96SB3 815 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 DIRC2Q96SL1 478 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 YME1L1Q96TA2 773 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 UNC45AQ9H3U1 944 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 STN1Q9H668 368 aaKnown RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM8AQ9HCN3 771 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 GCM1Q9NP62 436 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CFAP97Q9P2B7 532 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 HSFX1Q9UBD0 423 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 HDAC6Q9UBN7 1215 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 VPS51Q9UID3 782 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CUBNO60494 3623 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 BRCA2P51587 3418 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RBBP6Q7Z6E9 1792 aaKnown RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 AGAP14A8MT82 685 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 LEFTY2O00292 366 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 COQ9O75208 318 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 XRCC6P12956 609 aaKnown RBP eCLIP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 IGFBP6P24592 240 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 PBX1P40424 430 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 UBA7P41226 1012 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ETV4P43268 484 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CHN2P52757 468 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 EFNA5P52803 228 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SF3A3Q12874 501 aaKnown RBP eCLIP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SP140Q13342 867 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 FAM180AQ6UWF9 173 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 KRT77Q7Z794 578 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ELOA2Q8IYF1 753 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CFAP52Q8N1V2 620 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 Q8NA96 180 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SLC22A17Q8WUG5 538 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 RUFY2Q8WXA3 655 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 HAPLN3Q96S86 360 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SLC46A2Q9BY10 475 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CLPBQ9H078 707 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ENKD1Q9H0I2 346 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 LMAN2LQ9H0V9 348 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 EPC1Q9H2F5 836 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MROH8Q9H579 483 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 IL23AQ9NPF7 189 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ETAA1Q9NY74 926 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 MBD1Q9UIS9 605 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 SERTAD3Q9UJW9 196 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 CORO1CQ9ULV4 474 aaPredicted RBP1.83□□□□□ -2.12
BRCA1-202ENST00000354071 ZDHHC9Q9Y397 364 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 COL4A3Q01955 1670 aa1.83□□□□□ -2.12
BRCA1-202ENST00000354071 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms