RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DNAAF3Q8N9W5 541 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 ASZ1Q8WWH4 475 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 STARD8Q92502 1023 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 AIFM2Q9BRQ8 373 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 CALN1Q9BXU9 219 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 EBF3Q9H4W6 596 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 CACNA2D2Q9NY47 1150 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 ZSWIM5Q9P217 1185 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 ZC3H7BQ9UGR2 993 aaKnown RBP5.2□□□□□ -1.58
SKP1-202ENST00000353411 PCYOX1Q9UHG3 505 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 CROCC2H7BZ55 1655 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 PALLDQ8WX93 1383 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 TRIM64A6NGJ6 449 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 TRIM64BA6NI03 449 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 SORBS3O60504 671 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 APOL3O95236 402 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 TGDSO95455 350 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 MCCD1P59942 119 aaPredicted RBP5.2□□□□□ -1.58
SKP1-202ENST00000353411 NADK2Q4G0N4 442 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 C4orf22Q6V702 233 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 RAB43Q86YS6 212 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 KBTBD2Q8IY47 623 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 NDUFAF2Q8N183 169 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 FAM172AQ8WUF8 416 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 RAD54LQ92698 747 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 USP13Q92995 863 aaPredicted RBP5.2□□□□□ -1.58
SKP1-202ENST00000353411 SLC6A15Q9H2J7 730 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 XPO7Q9UIA9 1087 aaKnown RBP5.2□□□□□ -1.58
SKP1-202ENST00000353411 FAM32AQ9Y421 112 aaKnown RBP5.2□□□□□ -1.58
SKP1-202ENST00000353411 FLT1P17948 1338 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 A0A087X0T9 212 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GABBR2O75899 941 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 YES1P07947 543 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SERPINB5P36952 375 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ROR1Q01973 937 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 COASYQ13057 564 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 NRF1Q16656 503 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SAMD4BQ5PRF9 694 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 C10orf62Q5T681 223 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 PLEKHM3Q6ZWE6 761 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SAPCD2Q86UD0 394 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 KBTBD8Q8NFY9 601 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SLC30A5Q8TAD4 765 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SH3KBP1Q96B97 665 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PIDD1Q9HB75 910 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CCDC177Q9NQR7 707 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 ARMCX1Q9P291 453 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MLXQ9UH92 298 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 E9PBE3 544 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 KLK7P49862 253 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 THOP1P52888 689 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 POLD3Q15054 466 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 QPRTQ15274 297 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 DENND5AQ6IQ26 1287 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 BBS5Q8N3I7 341 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PNMA1Q8ND90 353 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 POMGNT1Q8WZA1 660 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 RMND5AQ9H871 391 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 LY9Q9HBG7 655 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TMEM9Q9P0T7 183 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PCDHB4Q9Y5E5 795 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MROH2AA6NES4 1674 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MED7O43513 233 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CHKAP35790 457 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MRPS22P82650 360 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 CCDC142Q17RM4 750 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PPM1LQ5SGD2 360 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TCP10LQ8TDR4 215 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 MED30Q96HR3 178 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 C8orf37Q96NL8 207 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 INTS13Q9NVM9 706 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PFDN2Q9UHV9 154 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CLEC11AQ9Y240 323 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 RPL21P46778 160 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 CTC1Q2NKJ3 1217 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TBCELQ5QJ74 424 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 LRRC8DQ7L1W4 858 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 KRT74Q7RTS7 529 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SLCO6A1Q86UG4 719 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CCDC36Q8IYA8 594 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 GPKOWQ92917 476 aaPredicted RBP eCLIP5.19□□□□□ -1.58
SKP1-202ENST00000353411 ARHGEF26Q96DR7 871 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PAFAH2Q99487 392 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PUS3Q9BZE2 481 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 CXorf21Q9HAI6 301 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 TTC34A8MYJ7 566 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 BOLA2-SMG1P6H3BVE0 249 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 SNAP23O00161 211 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 RNF103O00237 685 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 PRPF4O43172 522 aaKnown RBP eCLIP5.19□□□□□ -1.58
SKP1-202ENST00000353411 TLR2O60603 784 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 CD44P16070 742 aaKnown RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 BGNP21810 368 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 COMTP21964 271 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 RRM1P23921 792 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ITGA1P56199 1179 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 ZBED5Q49AG3 693 aa5.19□□□□□ -1.58
SKP1-202ENST00000353411 EAPPQ56P03 285 aaPredicted RBP5.19□□□□□ -1.58
SKP1-202ENST00000353411 SEL1L3Q68CR1 1132 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms