RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TAMM41Q96BW9 452 aa13.74□□□□□ -0.21
IFT88-202ENST00000351808 ANKRD34BA5PLL1 514 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 KRT10P13645 584 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 STAT2P52630 851 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FRMD7Q6ZUT3 714 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CATSPER3Q86XQ3 398 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 RHPN2Q8IUC4 686 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 NUDCD3Q8IVD9 361 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CHERPQ8IWX8 916 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 PALM2Q8IXS6 379 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 PCYOX1LQ8NBM8 494 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FBXO36Q8NEA4 188 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CATSPER1Q8NEC5 780 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 PKP2Q99959 881 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 GCOM2Q9BZD3 368 aaPredicted RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 TMEM117Q9H0C3 514 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 KLHL11Q9NVR0 708 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CARD8Q9Y2G2 431 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 IQANK1A0A1B0GTG1 560 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 H3BNH8 94 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 SLITRK3O94933 977 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CCT8P50990 548 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 SBK1Q52WX2 424 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 C2CD6Q53TS8 623 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FAM182AQ5T1J6 154 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 PTCD2Q8WV60 388 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 MMP19Q99542 508 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 WDR83Q9BRX9 315 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 CENPOQ9BU64 300 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 PARVBQ9HBI1 364 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FETUBQ9UGM5 382 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ITGA11Q9UKX5 1188 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 MYRFQ9Y2G1 1151 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 A0A1B0GUL6 1792 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ASTN2O75129 1339 aaPredicted RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 CACNA1SQ13698 1873 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 A0A0B4J269 797 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 GIPC1O14908 333 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ESRRBO95718 433 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 ATXN3P54252 364 aaPredicted RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 DLG4P78352 724 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 TUBB3Q13509 450 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 TRIM16LQ309B1 348 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FGD3Q5JSP0 725 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 ZNF444Q8N0Y2 327 aaPredicted RBP13.73□□□□□ -0.21
IFT88-202ENST00000351808 GNPTGQ9UJJ9 305 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 FRMD4BQ9Y2L6 1034 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 IKBKGQ9Y6K9 419 aa13.73□□□□□ -0.21
IFT88-202ENST00000351808 C7orf72A4D263 438 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 A6NL46 340 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 H0YIN7 160 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 LIASO43766 372 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TBCAO75347 108 aaKnown RBP13.72□□□□□ -0.21
IFT88-202ENST00000351808 KLHL2O95198 593 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 S100BP04271 92 aaPredicted RBP13.72□□□□□ -0.21
IFT88-202ENST00000351808 BTDP43251 543 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 HSPA13P48723 471 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 CHRNDQ07001 517 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TEX44Q53QW1 395 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 PPP2R2DQ66LE6 453 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 CIAPIN1Q6FI81 312 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 RSPH3Q86UC2 560 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 SLC15A4Q8N697 577 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TRPC4APQ8TEL6 797 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
IFT88-202ENST00000351808 CTRCQ99895 268 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 SLC13A1Q9BZW2 595 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 OLAHQ9NV23 265 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 SORCS3Q9UPU3 1222 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 DNM3Q9UQ16 869 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 ARAP2Q8WZ64 1704 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 ARHGEF37A1IGU5 675 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TMEM114B3SHH9 223 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 PI4K2BG5E9Z4 385 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
IFT88-202ENST00000351808 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
IFT88-202ENST00000351808 GABRB3P28472 473 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 EPHA3P29320 983 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TRPC1P48995 793 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 HSD17B4P51659 736 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 TAS2R40P59535 323 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 ESRRGP62508 458 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 BBS9Q3SYG4 887 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
IFT88-202ENST00000351808 ANKRD22Q5VYY1 191 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 SIX5Q8N196 739 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms