RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PDGFRLQ15198 375 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 KLHDC10Q6PID8 442 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 BHLHA9Q7RTU4 235 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 ZNF687Q8N1G0 1237 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 AOPEPQ8N6M6 819 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 OSCP1Q8WVF1 389 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 C8orf33Q9H7E9 229 aaPredicted RBP23.26■■□□□ 1.31
SNX3-202ENST00000349379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.26■■□□□ 1.31
SNX3-202ENST00000349379 DLGAP2Q9P1A6 1054 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 HCN4Q9Y3Q4 1203 aa23.26■■□□□ 1.31
SNX3-202ENST00000349379 A0A1W2PQH9 124 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 PES1O00541 588 aaKnown RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 MAN2B1O00754 1011 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 MBL2P11226 248 aaPredicted RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 TARSP26639 723 aaKnown RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 TKTL1P51854 596 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 KLHDC7AQ5VTJ3 777 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 TRIM68Q6AZZ1 485 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 CC2D1AQ6P1N0 951 aaPredicted RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 DDX42Q86XP3 938 aaKnown RBP eCLIP23.25■■□□□ 1.31
SNX3-202ENST00000349379 DHX40Q8IX18 779 aaKnown RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 CCDC105Q8IYK2 499 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 SCML4Q8N228 414 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 ZNF606Q8WXB4 792 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 SECISBP2LQ93073 1101 aaKnown RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 NAA15Q9BXJ9 866 aaKnown RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 ACP6Q9NPH0 428 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 PLCB1Q9NQ66 1216 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 CLIC5Q9NZA1 410 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 RAPGEFL1Q9UHV5 662 aa23.25■■□□□ 1.31
SNX3-202ENST00000349379 ARIH1Q9Y4X5 557 aaPredicted RBP23.25■■□□□ 1.31
SNX3-202ENST00000349379 MUC6Q6W4X9 2439 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 SYCE3A1L190 88 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 OTOL1A6NHN0 477 aaPredicted RBP23.24■■□□□ 1.31
SNX3-202ENST00000349379 M0QYV0 167 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 GABBR2O75899 941 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 CD72P21854 359 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 RFX1P22670 979 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 GNA15P30679 374 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 CTHP32929 405 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 RPL34P49207 117 aaKnown RBP23.24■■□□□ 1.31
SNX3-202ENST00000349379 RUNX3Q13761 415 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 EML3Q32P44 896 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 ITPRIPL2Q3MIP1 535 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 PMF1Q6P1K2 205 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 C1orf228Q6PIY5 440 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 ZNF852Q6ZMS4 543 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 CHFRQ96EP1 664 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 NELL2Q99435 816 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 ULBP1Q9BZM6 244 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 EBF3Q9H4W6 596 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 LRRC4Q9HBW1 653 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 DUS2Q9NX74 493 aaKnown RBP23.24■■□□□ 1.31
SNX3-202ENST00000349379 SMPD4Q9NXE4 827 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 SIT1Q9Y3P8 196 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 MTF2Q9Y483 593 aaPredicted RBP23.24■■□□□ 1.31
SNX3-202ENST00000349379 FHOD1Q9Y613 1164 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 WNT6Q9Y6F9 365 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 KIAA1549LQ6ZVL6 1849 aa23.24■■□□□ 1.31
SNX3-202ENST00000349379 CACNA1IQ9P0X4 2223 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 FOXN3O00409 490 aaPredicted RBP23.23■■□□□ 1.31
SNX3-202ENST00000349379 STK25O00506 426 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 ZBED1O96006 694 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 RARGP13631 454 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 ARSAP15289 507 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 UCHL3P15374 230 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 GPD2P43304 727 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 SOX9P48436 509 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 ADIGQ0VDE8 80 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 FZD5Q13467 585 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 RALGPS2Q86X27 583 aaPredicted RBP23.23■■□□□ 1.31
SNX3-202ENST00000349379 FAM71AQ8IYT1 594 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 ANKRD20A12PQ8NF67 263 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 HSFY1Q96LI6 401 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 LSM14BQ9BX40 385 aaKnown RBP23.23■■□□□ 1.31
SNX3-202ENST00000349379 GANQ9H2C0 597 aa23.23■■□□□ 1.31
SNX3-202ENST00000349379 MRPS17Q9Y2R5 130 aaKnown RBP23.23■■□□□ 1.31
SNX3-202ENST00000349379 LGALS16A8MUM7 142 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 SPECC1L-ADORA2AF8WAN1 911 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 MED7O43513 233 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 TBX18O95935 607 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 TPM2P07951 284 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 ATP5C1P36542 298 aaKnown RBP23.22■■□□□ 1.31
SNX3-202ENST00000349379 ZNF165P49910 485 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 IQCB1Q15051 598 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 TXNDC11Q6PKC3 985 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 ARHGAP18Q8N392 663 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 FAM3CQ92520 227 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 CLDN23Q96B33 292 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 PRRX2Q99811 253 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 KLF16Q9BXK1 252 aaPredicted RBP23.22■■□□□ 1.31
SNX3-202ENST00000349379 CNGB3Q9NQW8 809 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 CFAP97Q9P2B7 532 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 NAGPAQ9UK23 515 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 SIK3Q9Y2K2 1263 aa23.22■■□□□ 1.31
SNX3-202ENST00000349379 E2F8A0AVK6 867 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 FAM170BA6NMN3 283 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 SMTNL1A8MU46 457 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 THAP12O43422 761 aa23.21■■□□□ 1.31
SNX3-202ENST00000349379 ATP1A3P13637 1013 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms