RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 PFKMP08237 780 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 DHRS4L1P0CG22 281 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 SDC4P31431 198 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 PSMC4P43686 418 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 CCNA1P78396 465 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 MMRN1Q13201 1228 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 PTK7Q13308 1070 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 PKDCCQ504Y2 493 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 ARCQ7LC44 396 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 SLC26A11Q86WA9 606 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 UNC93AQ86WB7 457 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 CDKL3Q8IVW4 592 aaPredicted RBP16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 APOPT1Q96IL0 206 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 CPB2Q96IY4 423 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 NOP53Q9NZM5 478 aaKnown RBP16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 CHMP2BQ9UQN3 213 aa16.11■□□□□ 0.17
TNFSF13-202ENST00000349228 TCRBV9S1A1TA0A576 114 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 TSPAN1O60635 241 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 LPXNO60711 386 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 CYP3A5P20815 502 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 EFTUD2Q15029 972 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 GOLGA7BQ2TAP0 167 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 TTC39BQ5VTQ0 682 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 TAPT1Q6NXT6 567 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 OLFML1Q6UWY5 402 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 ZC3H18Q86VM9 953 aaKnown RBP16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 TRIM42Q8IWZ5 723 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 NLRP7Q8WX94 980 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 KIF12Q96FN5 646 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 CLMNQ96JQ2 1002 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 TRIM55Q9BYV6 548 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 PCDH18Q9HCL0 1135 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 RAB6BQ9NRW1 208 aa16.1■□□□□ 0.17
TNFSF13-202ENST00000349228 KRT37O76014 449 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ZBED1O96006 694 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ADRA1DP25100 572 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 PTPN9P43378 593 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 NEK3P51956 506 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 YWHAGP61981 247 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 TRNP1Q6NT89 227 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 NPNTQ6UXI9 565 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 KIF2BQ8N4N8 673 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ANKRD27Q96NW4 1050 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 KLF11O14901 512 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 KCNN4O15554 427 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 CYP2C8P10632 490 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 IL4RP24394 825 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 NR2C2P49116 596 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 E2F5Q15329 346 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 C15orf59Q2T9L4 293 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 DPH6Q7L8W6 267 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 NLRP9Q7RTR0 991 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 AGAP11Q8TF27 550 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 SLC35F5Q8WV83 523 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ZBTB10Q96DT7 871 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 LNPEPQ9UIQ6 1025 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 STK38LQ9Y2H1 464 aa16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 MTO1Q9Y2Z2 717 aaKnown RBP16.09■□□□□ 0.17
TNFSF13-202ENST00000349228 ZSWIM8A7E2V4 1837 aa16.08■□□□□ 0.17
TNFSF13-202ENST00000349228 VTNP04004 478 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 SNRPAP09012 282 aaKnown RBP16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 PRKCHP24723 683 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 KBTBD12Q3ZCT8 623 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 SH3PXD2AQ5TCZ1 1133 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 SH2D5Q6ZV89 423 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 IGDCC3Q8IVU1 814 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 PQLC3Q8N755 202 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 TBC1D31Q96DN5 1066 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 MTBPQ96DY7 904 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 TSPAN18Q96SJ8 248 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 ZFP69BQ9UJL9 534 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 OTOFQ9HC10 1997 aa16.08■□□□□ 0.16
TNFSF13-202ENST00000349228 GCATO75600 419 aa16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 DDNO94850 711 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 ETV4P43268 484 aa16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 PPP1R26Q5T8A7 1209 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 BEST2Q8NFU1 509 aa16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 CFAP61Q8NHU2 1237 aa16.07■□□□□ 0.16
TNFSF13-202ENST00000349228 OPTNQ96CV9 577 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms