RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 SPOUT1Q5T280 376 aaKnown RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 SCYL2Q6P3W7 929 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CCDC137Q6PK04 289 aaKnown RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 VSTM1Q6UX27 236 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 KCTD6Q8NC69 237 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 HSPH1Q92598 858 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 ZNF689Q96CS4 500 aaPredicted RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 PEBP4Q96S96 227 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 TTPALQ9BTX7 342 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 TRIM62Q9BVG3 475 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 MCOLN1Q9GZU1 580 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 RAB17Q9H0T7 212 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 IL23AQ9NPF7 189 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 GDF3Q9NR23 364 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 PRKAG2Q9UGJ0 569 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 PCDHB5Q9Y5E4 795 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 COL4A6Q14031 1691 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CAPN9O14815 690 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 USP17L7P0C7H9 530 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 COILP38432 576 aaPredicted RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 SULT1E1P49888 294 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 HDAC4P56524 1084 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 DEFB103AP81534 67 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 SMARCB1Q12824 385 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 DCAF6Q58WW2 860 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CCNI2Q6ZMN8 369 aaPredicted RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 MAP7D3Q8IWC1 876 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 CMTR2Q8IYT2 770 aaKnown RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 NDRG1Q92597 394 aaKnown RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 HERPUD2Q9BSE4 406 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 EPB41L5Q9HCM4 733 aa19.51■□□□□ 0.71
PTN-201ENST00000348225 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.51■□□□□ 0.71
PTN-201ENST00000348225 UTP11Q9Y3A2 253 aaKnown RBP19.51■□□□□ 0.71
PTN-201ENST00000348225 C3orf70A6NLC5 250 aaPredicted RBP19.5■□□□□ 0.71
PTN-201ENST00000348225 TRIM66O15016 1216 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 MDM4O15151 490 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 TTI1O43156 1089 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 CYP2F1P24903 491 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 MAGEA11P43364 429 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 RABGGTBP53611 331 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 KAZNQ674X7 775 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 PM20D1Q6GTS8 502 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 UBE2Q1Q7Z7E8 422 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 TMEM173Q86WV6 379 aaPredicted RBP19.5■□□□□ 0.71
PTN-201ENST00000348225 CCDC105Q8IYK2 499 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 RRN3Q9NYV6 651 aa19.5■□□□□ 0.71
PTN-201ENST00000348225 YJEFN3A6XGL0 299 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 E7ENQ6 273 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 LTFP02788 710 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 KRT10P13645 584 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 CPB1P15086 417 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 PPIGQ13427 754 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTN-201ENST00000348225 KRT81Q14533 505 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 PDK2Q15119 407 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 CCNG2Q16589 344 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 TAZQ16635 292 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 USP41Q3LFD5 358 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 RTP2Q5QGT7 225 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 CYP4V2Q6ZWL3 525 aaPredicted RBP19.49■□□□□ 0.71
PTN-201ENST00000348225 ANKS1BQ7Z6G8 1248 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 SCN4BQ8IWT1 228 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 GRK7Q8WTQ7 553 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 BCL7CQ8WUZ0 217 aaPredicted RBP19.49■□□□□ 0.71
PTN-201ENST00000348225 C1orf54Q8WWF1 131 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 IGSF21Q96ID5 467 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 B3GALT6Q96L58 329 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 ZNF558Q96NG5 402 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 DCLK3Q9C098 648 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 RC3H2Q9HBD1 1191 aaKnown RBP19.49■□□□□ 0.71
PTN-201ENST00000348225 FEZ2Q9UHY8 353 aaPredicted RBP19.49■□□□□ 0.71
PTN-201ENST00000348225 USP3Q9Y6I4 520 aa19.49■□□□□ 0.71
PTN-201ENST00000348225 ACRP10323 421 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 LAG3P18627 525 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 EN2P19622 333 aaPredicted RBP19.48■□□□□ 0.71
PTN-201ENST00000348225 RDXP35241 583 aaKnown RBP19.48■□□□□ 0.71
PTN-201ENST00000348225 CDH6P55285 790 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 CUL1Q13616 776 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 BTG3Q14201 252 aaPredicted RBP19.48■□□□□ 0.71
PTN-201ENST00000348225 RAB6CQ53S08 254 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 FAM117BQ6P1L5 589 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 TTC27Q6P3X3 843 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 KCNT2Q6UVM3 1135 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 JAMLQ86YT9 394 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 EIF1ADQ8N9N8 165 aaKnown RBP19.48■□□□□ 0.71
PTN-201ENST00000348225 SPPL2BQ8TCT7 592 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 C2orf15Q8WU43 125 aaKnown RBP19.48■□□□□ 0.71
PTN-201ENST00000348225 NT5C3BQ969T7 300 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 C8orf48Q96LL4 319 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 NPY6RQ99463 290 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 CALN1Q9BXU9 219 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 RAB6CQ9H0N0 254 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 PLEKHA4Q9H4M7 779 aa19.48■□□□□ 0.71
PTN-201ENST00000348225 TBC1D4O60343 1298 aa19.47■□□□□ 0.71
PTN-201ENST00000348225 TFE3P19532 575 aaPredicted RBP19.47■□□□□ 0.71
PTN-201ENST00000348225 SLC5A3P53794 718 aa19.47■□□□□ 0.71
PTN-201ENST00000348225 GPR17Q13304 367 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms