RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LMO3Q8TAP4 145 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CHRDQ9H2X0 955 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 HPS4Q9NQG7 708 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CLIC5Q9NZA1 410 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 FBXO4Q9UKT5 387 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 ANAPC1Q9H1A4 1944 aa16.6■□□□□ 0.25
TSPAN4-201ENST00000346501 CYP26A1O43174 497 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 ADH1CP00326 375 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 RARGP13631 454 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 DRD1P21728 446 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 TKTL1P51854 596 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 PDE4CQ08493 712 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 CNGA2Q16280 664 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 EML3Q32P44 896 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 FBXO43Q4G163 708 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 BTBD8Q5XKL5 378 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 SMYD5Q6GMV2 418 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 KLHDC10Q6PID8 442 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 LCLAT1Q6UWP7 414 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 GPRIN1Q7Z2K8 1008 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 ARHGEF19Q8IW93 802 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 GOLGA1Q92805 767 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 P2RY13Q9BPV8 354 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 TUBGCP2Q9BSJ2 902 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 CYLDQ9NQC7 956 aa16.59■□□□□ 0.25
TSPAN4-201ENST00000346501 A0A1W2PQH9 124 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 KCNJ18B7U540 433 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 M0QYV0 167 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 O00370 1275 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 TRDMT1O14717 391 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 ATG13O75143 517 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 ZBED1O96006 694 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 IRF1P10914 325 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 CHRNB1P11230 501 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 EEF1GP26641 437 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 GJA4P35212 333 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 USP8P40818 1118 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 PLA2G4AP47712 749 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 NRLP54845 237 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 COG7P83436 770 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 CSTF1Q05048 431 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 KCNJ12Q14500 433 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 STX1AQ16623 288 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 VWA3BQ502W6 1294 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 NUDT18Q6ZVK8 323 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 SPEM1Q8N4L4 309 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 UBR7Q8N806 425 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 UBA3Q8TBC4 463 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 ENOX1Q8TC92 643 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 CD101Q93033 1021 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 LINC00597Q9H2U6 94 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 SEMA4AQ9H3S1 761 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 OLA1Q9NTK5 396 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 FAM86C1Q9NVL1 165 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 APEX2Q9UBZ4 518 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 NFE2L3Q9Y4A8 694 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 USP3Q9Y6I4 520 aa16.58■□□□□ 0.24
TSPAN4-201ENST00000346501 CXCL12P48061 93 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 YWHAGP61981 247 aaKnown RBP eCLIP16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 ARHGAP44Q17R89 818 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 ZNF528Q3MIS6 628 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 TXNDC11Q6PKC3 985 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 TTC30AQ86WT1 665 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 IRF2BP1Q8IU81 584 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 ZNF276Q8N554 614 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 RIN3Q8TB24 985 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 ATRIPQ8WXE1 791 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 KAT5Q92993 513 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 MED15Q96RN5 788 aa16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 FAM126AQ9BYI3 521 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 NAT10Q9H0A0 1025 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
TSPAN4-201ENST00000346501 CACNA1HO95180 2353 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 SP9P0CG40 484 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 SLC9A1P19634 815 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 BRD2P25440 801 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 GAD2Q05329 585 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 ADIGQ0VDE8 80 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 MTAPQ13126 283 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 HSP90AA4PQ58FG1 418 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 TMEM196Q5HYL7 178 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 RAB41Q5JT25 222 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 MAMSTRQ6ZN01 415 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 KCTD13Q8WZ19 329 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 NKD2Q969F2 451 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 ULBP1Q9BZM6 244 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 DCLK3Q9C098 648 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms