RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 PDE6CP51160 858 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
UBE2A-201ENST00000346330 ELF2Q15723 593 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 ZACNQ401N2 412 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 ZNF667Q5HYK9 610 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 RNF43Q68DV7 783 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 ARMCX6Q7L4S7 300 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 PNKPQ96T60 521 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
UBE2A-201ENST00000346330 APOBEC3GQ9HC16 384 aaKnown RBP11.61□□□□□ -0.55
UBE2A-201ENST00000346330 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
UBE2A-201ENST00000346330 FSCN3Q9NQT6 498 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 ARHGEF4Q9NR80 690 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 TMEM74BQ9NUR3 256 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 RCOR1Q9UKL0 485 aa11.61□□□□□ -0.55
UBE2A-201ENST00000346330 A0A0A0MRY4 1105 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 E2F8A0AVK6 867 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 CDX4O14627 284 aaPredicted RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 MDM4O15151 490 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 CYP26A1O43174 497 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 FOXD2O60548 495 aaPredicted RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 TULP3O75386 442 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 CLSTN1O94985 981 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 KCNK5O95279 499 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 TOP3BO95985 862 aaKnown RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 NR3C1P04150 777 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 PFKFB1P16118 471 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 P2RY2P41231 377 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 WASP42768 502 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 PPP3CCP48454 512 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 MAP3K7CLP57077 242 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 IRX4P78413 519 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 USP39Q53GS9 565 aaKnown RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 SNX30Q5VWJ9 437 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 PSAPL1Q6NUJ1 521 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 TMEFF1Q8IYR6 380 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 ACOX2Q99424 681 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 NMUR1Q9HB89 426 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 FAM13BQ9NYF5 915 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 NUDT5Q9UKK9 219 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 MAPK8IP1Q9UQF2 711 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 ZDHHC9Q9Y397 364 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
UBE2A-201ENST00000346330 ATXN2Q99700 1313 aaKnown RBP11.6□□□□□ -0.55
UBE2A-201ENST00000346330 ZNF638Q14966 1978 aaKnown RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ZFYVE26Q68DK2 2539 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 SPAG17Q6Q759 2223 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ABCA7Q8IZY2 2146 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 HELZP42694 1942 aaKnown RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 HOXC11O43248 304 aaPredicted RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 RHOBTB1O94844 696 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 RTN3O95197 1032 aaPredicted RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ADH1CP00326 375 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ASS1P00966 412 aaKnown RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 HLA-DRAP01903 254 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 TRIM49P0CI25 452 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 TRIM49CP0CI26 452 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 SPINK2P20155 84 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ADORA2BP29275 332 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 GRIA2P42262 883 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 DHPSP49366 369 aaPredicted RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 MRPS21P82921 87 aaKnown RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 PPP3CAQ08209 521 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 ST3GAL2Q16842 350 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CEP135Q66GS9 1140 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 TOGARAM2Q6ZUX3 1019 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 SLC9A9Q8IVB4 645 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 DEFB119Q8N690 84 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 TAS1R2Q8TE23 839 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 HMGB4Q8WW32 186 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 OVCA2Q8WZ82 227 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 EXOC4Q96A65 974 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 SMARCD1Q96GM5 515 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 KLF16Q9BXK1 252 aaPredicted RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CSNK1G1Q9HCP0 422 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CD248Q9HCU0 757 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CD93Q9NPY3 652 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 EHD2Q9NZN4 543 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
UBE2A-201ENST00000346330 HPSEQ9Y251 543 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
UBE2A-201ENST00000346330 LAMA5O15230 3695 aa11.58□□□□□ -0.55
UBE2A-201ENST00000346330 TCRBV21S2A2A0A5A6 115 aa11.58□□□□□ -0.56
UBE2A-201ENST00000346330 TBC1D3BA6NDS4 549 aa11.58□□□□□ -0.56
UBE2A-201ENST00000346330 SLC9A3R1O14745 358 aaPredicted RBP11.58□□□□□ -0.56
UBE2A-201ENST00000346330 TLR5O60602 858 aa11.58□□□□□ -0.56
UBE2A-201ENST00000346330 APODP05090 189 aa11.58□□□□□ -0.56
UBE2A-201ENST00000346330 EIF2DP41214 584 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms