RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TMEM30AQ9NV96 361 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 ZNHIT6Q9NWK9 470 aaKnown RBP12.46□□□□□ -0.41
SNCA-202ENST00000345009 AIPL1Q9NZN9 384 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 IGSF9Q9P2J2 1179 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 CHORDC1Q9UHD1 332 aaPredicted RBP12.46□□□□□ -0.41
SNCA-202ENST00000345009 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
SNCA-202ENST00000345009 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 FAM92AA1XBS5 289 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 ZNF840PA6NDX5 716 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 C2CD4DB7Z1M9 353 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 HHLA1C9JL84 531 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 PNMA6AP0CW24 399 aaPredicted RBP12.45□□□□□ -0.42
SNCA-202ENST00000345009 RALAP11233 206 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 LCP1P13796 627 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 GJA1P17302 382 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 CEBPBP17676 345 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 HDCP19113 662 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 SP100P23497 879 aaPredicted RBP12.45□□□□□ -0.42
SNCA-202ENST00000345009 CCR2P41597 374 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 TUBP50607 506 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 HECTD3Q5T447 861 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 TAF3Q5VWG9 929 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 PMF1Q6P1K2 205 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 DENND1BQ6P3S1 775 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 CCDC186Q7Z3E2 898 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 VSTM4Q8IW00 320 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 SCML4Q8N228 414 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 IPO4Q8TEX9 1081 aaKnown RBP12.45□□□□□ -0.42
SNCA-202ENST00000345009 BAP1Q92560 729 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 SMARCD2Q92925 531 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 MYADMQ96S97 322 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 ZFP14Q9HCL3 533 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 TRPC7Q9HCX4 862 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 SPTBN5Q9NRC6 3674 aaKnown RBP12.45□□□□□ -0.42
SNCA-202ENST00000345009 PTPRDP23468 1912 aa12.45□□□□□ -0.42
SNCA-202ENST00000345009 LRRC53A6NM62 1247 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 MOSPD3O75425 235 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 CALCAP01258 141 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 CKMP06732 381 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 USP17L7P0C7H9 530 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 WEE1P30291 646 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 RGS7P49802 495 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 PTPN5P54829 565 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 KLHL30Q0D2K2 578 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 ADIGQ0VDE8 80 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 PTPN21Q16825 1174 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 SNX30Q5VWJ9 437 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 TXNDC8Q6A555 127 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 TMEM110Q86TL2 294 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 NOP9Q86U38 636 aaKnown RBP12.44□□□□□ -0.42
SNCA-202ENST00000345009 CMTM8Q8IZV2 173 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 MAB21L3Q8N8X9 362 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 ZSCAN18Q8TBC5 510 aaPredicted RBP12.44□□□□□ -0.42
SNCA-202ENST00000345009 FEZF2Q8TBJ5 459 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 IRGQQ8WZA9 623 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 PPP1R13BQ96KQ4 1090 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 UHRF1Q96T88 793 aaPredicted RBP12.44□□□□□ -0.42
SNCA-202ENST00000345009 TTYH3Q9C0H2 523 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 SEPT11Q9NVA2 429 aaKnown RBP12.44□□□□□ -0.42
SNCA-202ENST00000345009 CLIC5Q9NZA1 410 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 GMIPQ9P107 970 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 NAGPAQ9UK23 515 aa12.44□□□□□ -0.42
SNCA-202ENST00000345009 BDP1A6H8Y1 2624 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ZDHHC11BP0C7U3 371 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 CASP14P31944 242 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 CYP4F8P98187 520 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 GOLGA8FQ08AF8 430 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 GOLGA8DPQ0D2H9 430 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 PDCLQ13371 301 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 FAM78AQ5JUQ0 283 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 BTBD8Q5XKL5 378 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 GPRIN1Q7Z2K8 1008 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 IRF2BP2Q7Z5L9 587 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 TMEM150AQ86TG1 271 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ERICH1Q86X53 443 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ZDHHC17Q8IUH5 632 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 PASD1Q8IV76 773 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ARID3BQ8IVW6 561 aaPredicted RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ZNF276Q8N554 614 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 CELF5Q8N6W0 485 aaKnown RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 RNF139Q8WU17 664 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 DDX1Q92499 740 aaKnown RBP12.43□□□□□ -0.42
SNCA-202ENST00000345009 ASB16Q96NS5 453 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 AGPAT1Q99943 283 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 ULBP1Q9BZM6 244 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
SNCA-202ENST00000345009 TRPV4Q9HBA0 871 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms