RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 IL37Q9NZH6 218 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 LTFP02788 710 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 NOS2P35228 1153 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 PCK1P35558 622 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 RWDD2BP57060 319 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SPRED2Q7Z698 418 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 CENPIQ92674 756 aaPredicted RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 UBE2OQ9C0C9 1292 aaKnown RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 CHD9Q3L8U1 2897 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 TEX28O15482 410 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 CEP104O60308 925 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 SLU7O95391 586 aaKnown RBP17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 SEC24AO95486 1093 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 CXCL14O95715 111 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 RB1P06400 928 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 CA3P07451 260 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 ERVFC1P60507 584 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 ATP11AP98196 1134 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 SLC25A11Q02978 314 aaKnown RBP17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 DENND5BQ6ZUT9 1274 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 STKLD1Q8NE28 680 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 FAM172AQ8WUF8 416 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 NT5C3BQ969T7 300 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 MS4A14Q96JA4 679 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 NCAPGQ9BPX3 1015 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 ADAM33Q9BZ11 813 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 FBXO44Q9H4M3 255 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 IRAK3Q9Y616 596 aa17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
CEACAM1-202ENST00000344391 FAM92AA1XBS5 289 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 RTN3O95197 1032 aaPredicted RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 PYGMP11217 842 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 DESP17661 470 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 ATF6P18850 670 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 TFE3P19532 575 aaPredicted RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 MIPP30301 263 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 USP46P62068 366 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 UBE3AQ05086 875 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 CKAP4Q07065 602 aaKnown RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 HADHQ16836 314 aaKnown RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 CDO1Q16878 200 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 SLC25A52Q3SY17 297 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 RAB6CQ53S08 254 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 DCAF6Q58WW2 860 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 SYPL2Q5VXT5 272 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 BSPRYQ5W0U4 402 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 TXNRD3NBQ6F5E7 133 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 BEND5Q7L4P6 421 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 POLNQ7Z5Q5 900 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 KATNAL2Q8IYT4 538 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 ACTRT1Q8TDG2 376 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 GPR152Q8TDT2 470 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 NPY6RQ99463 290 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 COMMD8Q9NX08 183 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 TTC7AQ9ULT0 858 aaPredicted RBP17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 NAALADL1Q9UQQ1 740 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 SCML2Q9UQR0 700 aa17.08■□□□□ 0.32
CEACAM1-202ENST00000344391 CAPN9O14815 690 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ENDOD1O94919 500 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TRUB2O95900 331 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 DNAJB1P25685 340 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 IL1R2P27930 398 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 HDAC4P56524 1084 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ZNF211Q13398 564 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 CCDC181Q5TID7 509 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 STRADAQ7RTN6 431 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ZNF572Q7Z3I7 529 aaPredicted RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 BNIPLQ7Z465 357 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 SCD5Q86SK9 330 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 GOLGA1Q92805 767 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 SAMD11Q96NU1 681 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TBCBQ99426 244 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 TCF25Q9BQ70 676 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 CYP4F11Q9HBI6 524 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 NGRNQ9NPE2 291 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 SMARCAL1Q9NZC9 954 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 STAP1Q9ULZ2 295 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 USP18Q9UMW8 372 aa17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 YBX2Q9Y2T7 364 aaKnown RBP17.07■□□□□ 0.32
CEACAM1-202ENST00000344391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms