RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SLCO1B7G3V0H7 640 aa14.06□□□□□ -0.16
TRIO-202ENST00000344204 FDPSP14324 419 aaKnown RBP14.06□□□□□ -0.16
TRIO-202ENST00000344204 VAC14Q08AM6 782 aa14.06□□□□□ -0.16
TRIO-202ENST00000344204 VTA1Q9NP79 307 aa14.06□□□□□ -0.16
TRIO-202ENST00000344204 MIA3Q5JRA6 1907 aa14.06□□□□□ -0.16
TRIO-202ENST00000344204 GRIN2DO15399 1336 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 SLC5A3P53794 718 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 IL5RAQ01344 420 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 DHX36Q9H2U1 1008 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 GYG1P46976 350 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 SRPK1Q96SB4 655 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 ANO3Q9BYT9 981 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 XDHP47989 1333 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 KATNA1O75449 491 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 ASLP04424 464 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 PKN2Q16513 984 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 TPTE2Q6XPS3 522 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 A1BGP04217 495 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 LGALS3BPQ08380 585 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 FAM98BQ52LJ0 330 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 AGKQ53H12 422 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 ZNF280DQ6N043 979 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 SH3BP5LQ7L8J4 393 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 CCNJLQ8IV13 435 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 CENPLQ8N0S6 344 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 L3MBTL3Q96JM7 780 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 MARCH7Q9H992 704 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 AMIGO2Q86SJ2 522 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 HACE1Q8IYU2 909 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 CPA5Q8WXQ8 436 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 TESPA1A2RU30 521 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 HK2P52789 917 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 FOXN3O00409 490 aaPredicted RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 RFC4P35249 363 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 QPRTQ15274 297 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 TSNQ15631 228 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 TIMM50Q3ZCQ8 353 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 S100A14Q9HCY8 104 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 KRT87PA6NCN2 255 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 SERPINE1P05121 402 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 MTM1Q13496 603 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 UTS2BQ765I0 119 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 EFL1Q7Z2Z2 1120 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 SLCO6A1Q86UG4 719 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 CHKBQ9Y259 395 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 PPHLN1Q8NEY8 458 aaKnown RBP14.05□□□□□ -0.16
TRIO-202ENST00000344204 PLEKHA8Q96JA3 519 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
TRIO-202ENST00000344204 FMN2Q9NZ56 1722 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 CHRNA2Q15822 529 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 FBXO36Q8NEA4 188 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 RDM1Q8NG50 284 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 UCMAQ8WVF2 138 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 THAP2Q9H0W7 228 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 ELOVL6Q9H5J4 265 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 DENND2DQ9H6A0 471 aaPredicted RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 PTGES3LE9PB15 166 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 PSMD11O00231 422 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 FAM20BO75063 409 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 UPP2O95045 317 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 SDC4P31431 198 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 QARSP47897 775 aaKnown RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 FADS3Q9Y5Q0 445 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 KLHDC10Q6PID8 442 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 TKTP29401 623 aaKnown RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 C8orf4Q9NR00 106 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 COMMD8Q9NX08 183 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 ARHGAP20Q9P2F6 1191 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 NPHP3-ACAD11A0A0J9YXS1 232 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 TOP3AQ13472 1001 aaPredicted RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 MRPL39Q9NYK5 338 aaKnown RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 SRP68Q9UHB9 627 aaKnown RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 POLBP06746 335 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 FAM102AQ5T9C2 384 aaPredicted RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 SNX32Q86XE0 403 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 MAPRE3Q9UPY8 281 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 INPP4BO15327 924 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 EIF4BP23588 611 aaKnown RBP14.04□□□□□ -0.16
TRIO-202ENST00000344204 GSSP48637 474 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 USP17L2Q6R6M4 530 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 KIAA1586Q9HCI6 787 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 ARHGEF3Q9NR81 526 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 DDB1Q16531 1140 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 RNF38Q9H0F5 515 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
TRIO-202ENST00000344204 GATAD2AQ86YP4 633 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 ROGDIQ9GZN7 287 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 ETNK2Q9NVF9 386 aa14.03□□□□□ -0.16
TRIO-202ENST00000344204 GINS2Q9Y248 185 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms