RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.6
RPL28-201ENST00000344063 MAPK10P53779 464 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 SOX10P56693 466 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 CRY2Q49AN0 593 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 FASTKD1Q53R41 847 aaKnown RBP11.27□□□□□ -0.6
RPL28-201ENST00000344063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.27□□□□□ -0.6
RPL28-201ENST00000344063 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 ERAP1Q9NZ08 941 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 IL1RAPL1Q9NZN1 696 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 BTBD7Q9P203 1132 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 SUN2Q9UH99 717 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 TMEM150BA6NC51 233 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ZBTB7AO95365 584 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 SLC25A27O95847 323 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 MLH1P40692 756 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 RPS6KA3P51812 740 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 SLC25A3Q00325 362 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ZBTB41Q5SVQ8 909 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ZNF212Q9UDV6 495 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 PTPN11Q06124 597 aaPredicted RBP11.27□□□□□ -0.61
RPL28-201ENST00000344063 SPRED3Q2MJR0 410 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 SLC45A4Q5BKX6 768 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 LRRC38Q5VT99 294 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 FKBP1CQ5VVH2 108 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.61
RPL28-201ENST00000344063 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.27□□□□□ -0.61
RPL28-201ENST00000344063 SAR1AQ9NR31 198 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ANGPTL3Q9Y5C1 460 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 C3orf70A6NLC5 250 aaPredicted RBP11.27□□□□□ -0.61
RPL28-201ENST00000344063 CNTFP26441 200 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 JAM2P57087 298 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 EGFL6Q8IUX8 553 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
RPL28-201ENST00000344063 CATSPER2Q96P56 530 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 NSMCE4AQ9NXX6 385 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 GALNT8Q9NY28 637 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 NDUFA13Q9P0J0 144 aa11.27□□□□□ -0.61
RPL28-201ENST00000344063 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 A0A1W2PPM1 405 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 MTSS1O43312 755 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 TM4SF1P30408 202 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 HSD17B4P51659 736 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 CDK16Q00536 496 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 TSPY1Q01534 308 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 SLFN11Q7Z7L1 901 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 BRSK2Q8IWQ3 736 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 TMEM161BQ8NDZ6 487 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 FAM192AQ9GZU8 254 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 DDX28Q9NUL7 540 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 ARL8BQ9NVJ2 186 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 FKBP6O75344 327 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 ZMPSTE24O75844 475 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 CD4P01730 458 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 PROCP04070 461 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 PSMC3P17980 439 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 EIF4BP23588 611 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 MMP14P50281 582 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 NLRP11P59045 1033 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 FASTKD5Q7L8L6 764 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 EMC1Q8N766 993 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 DACT3Q96B18 629 aaPredicted RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 TLCD1Q96CP7 247 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 CLPTM1LQ96KA5 538 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 PLEKHA5Q9HAU0 1116 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 SAE1Q9UBE0 346 aaPredicted RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 DRG1Q9Y295 367 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 SNX13Q9Y5W8 968 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 UBIAD1Q9Y5Z9 338 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 GSTA4O15217 222 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 NKRFO15226 690 aaKnown RBP eCLIP11.26□□□□□ -0.612e-11■■■□□ 17.4
RPL28-201ENST00000344063 HDAC4P56524 1084 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 TBL3Q12788 808 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 RIPOR1Q6ZS17 1223 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 MARK2Q7KZI7 788 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 THEM5Q8N1Q8 247 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 DIS3LQ8TF46 1054 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 TFB1MQ8WVM0 346 aaKnown RBP11.26□□□□□ -0.61
RPL28-201ENST00000344063 TRAPPC9Q96Q05 1148 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 PPME1Q9Y570 386 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
RPL28-201ENST00000344063 E2F6O75461 281 aa11.25□□□□□ -0.61
RPL28-201ENST00000344063 PYGLP06737 847 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms