RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TMEM270Q6UE05 265 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 CLEC20AQ6ZU45 233 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 SCAMP5Q8TAC9 235 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 DUSP16Q9BY84 665 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 EBF3Q9H4W6 596 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 KIF9Q9HAQ2 790 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 HPS4Q9NQG7 708 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 C2orf42Q9NWW7 574 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 PCDHB4Q9Y5E5 795 aa19.04■□□□□ 0.64
USF2-202ENST00000343550 OTOL1A6NHN0 477 aaPredicted RBP19.03■□□□□ 0.64
USF2-202ENST00000343550 HRO43593 1189 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 RTN3O95197 1032 aaPredicted RBP19.03■□□□□ 0.64
USF2-202ENST00000343550 LETM1O95202 739 aaPredicted RBP19.03■□□□□ 0.64
USF2-202ENST00000343550 SDHBP21912 280 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 YWHAQP27348 245 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 MYL5Q02045 173 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 TAF10Q12962 218 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 SIM2Q14190 667 aaPredicted RBP19.03■□□□□ 0.64
USF2-202ENST00000343550 TRIM68Q6AZZ1 485 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 LAIR1Q6GTX8 287 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 CC2D1AQ6P1N0 951 aaPredicted RBP19.03■□□□□ 0.64
USF2-202ENST00000343550 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 LONP2Q86WA8 852 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 JAKMIP2Q96AA8 810 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 KIAA1257Q9ULG3 409 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 USP18Q9UMW8 372 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 CACNA1AO00555 2505 aa19.03■□□□□ 0.64
USF2-202ENST00000343550 MED19A0JLT2 244 aaPredicted RBP19.02■□□□□ 0.64
USF2-202ENST00000343550 HHLA1C9JL84 531 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 CNR2P34972 360 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 PPP3CCP48454 512 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 APBA1Q02410 837 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 LMNB2Q03252 620 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 ZNF268Q14587 947 aaPredicted RBP19.02■□□□□ 0.64
USF2-202ENST00000343550 NCAPHQ15003 741 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 ANO6Q4KMQ2 910 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 HEATR6Q6AI08 1181 aaKnown RBP19.02■□□□□ 0.64
USF2-202ENST00000343550 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 CYP2S1Q96SQ9 504 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 PARD6AQ9NPB6 346 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 COMMD8Q9NX08 183 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 TRPM5Q9NZQ8 1165 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 CNTN6Q9UQ52 1028 aa19.02■□□□□ 0.64
USF2-202ENST00000343550 CEP250Q9BV73 2442 aa19.02■□□□□ 0.63
USF2-202ENST00000343550 ZNF638Q14966 1978 aaKnown RBP19.02■□□□□ 0.63
USF2-202ENST00000343550 FAM92AA1XBS5 289 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 ZNF840PA6NDX5 716 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 PRR5-ARHGAP8B1AHC4 643 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 PAEPP09466 180 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 VDRP11473 427 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 HOXA6P31267 233 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 SLC5A3P53794 718 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 ARHGAP8P85298 464 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 GRSF1Q12849 480 aaKnown RBP eCLIP19.01■□□□□ 0.63
USF2-202ENST00000343550 IFRD2Q12894 506 aaPredicted RBP19.01■□□□□ 0.63
USF2-202ENST00000343550 SGO2Q562F6 1265 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 TMEM196Q5HYL7 178 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 GJB7Q6PEY0 223 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 ANKRD52Q8NB46 1076 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 FUCA2Q9BTY2 467 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 NAT10Q9H0A0 1025 aaKnown RBP19.01■□□□□ 0.63
USF2-202ENST00000343550 APEX2Q9UBZ4 518 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 CHORDC1Q9UHD1 332 aaPredicted RBP19.01■□□□□ 0.63
USF2-202ENST00000343550 OBSL1O75147 1896 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 MYH10P35580 1976 aa19.01■□□□□ 0.63
USF2-202ENST00000343550 TRDMT1O14717 391 aaKnown RBP19■□□□□ 0.63
USF2-202ENST00000343550 RETP07949 1114 aa19■□□□□ 0.63
USF2-202ENST00000343550 ARSAP15289 507 aa19■□□□□ 0.63
USF2-202ENST00000343550 MFAP3P55082 362 aa19■□□□□ 0.63
USF2-202ENST00000343550 AMPD2Q01433 879 aa19■□□□□ 0.63
USF2-202ENST00000343550 SPEM2Q0P670 501 aa19■□□□□ 0.63
USF2-202ENST00000343550 KCNMA1Q12791 1236 aa19■□□□□ 0.63
USF2-202ENST00000343550 SRSF5Q13243 272 aaKnown RBP19■□□□□ 0.63
USF2-202ENST00000343550 PDGFRLQ15198 375 aa19■□□□□ 0.63
USF2-202ENST00000343550 KRT31Q15323 416 aa19■□□□□ 0.63
USF2-202ENST00000343550 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
USF2-202ENST00000343550 FSTL4Q6MZW2 842 aa19■□□□□ 0.63
USF2-202ENST00000343550 DPY19L2P1Q6NXN4 242 aa19■□□□□ 0.63
USF2-202ENST00000343550 ENOSF1Q7L5Y1 443 aa19■□□□□ 0.63
USF2-202ENST00000343550 TFAP2BQ92481 460 aa19■□□□□ 0.63
USF2-202ENST00000343550 CHFRQ96EP1 664 aa19■□□□□ 0.63
USF2-202ENST00000343550 FAM81BQ96LP2 452 aa19■□□□□ 0.63
USF2-202ENST00000343550 SLITRK1Q96PX8 696 aa19■□□□□ 0.63
USF2-202ENST00000343550 SLC22A12Q96S37 553 aa19■□□□□ 0.63
USF2-202ENST00000343550 BPIFA3Q9BQP9 254 aa19■□□□□ 0.63
USF2-202ENST00000343550 UBXN6Q9BZV1 441 aa19■□□□□ 0.63
USF2-202ENST00000343550 VPS16Q9H269 839 aa19■□□□□ 0.63
USF2-202ENST00000343550 HSD3B7Q9H2F3 369 aa19■□□□□ 0.63
USF2-202ENST00000343550 TRPC7Q9HCX4 862 aa19■□□□□ 0.63
USF2-202ENST00000343550 PNPLA8Q9NP80 782 aa19■□□□□ 0.63
USF2-202ENST00000343550 SIX2Q9NPC8 291 aa19■□□□□ 0.63
USF2-202ENST00000343550 TAB2Q9NYJ8 693 aa19■□□□□ 0.63
USF2-202ENST00000343550 C2orf78A6NCI8 922 aa19■□□□□ 0.63
USF2-202ENST00000343550 LRRC10BA6NIK2 292 aa19■□□□□ 0.63
USF2-202ENST00000343550 PES1O00541 588 aaKnown RBP19■□□□□ 0.63
USF2-202ENST00000343550 USP17L7P0C7H9 530 aa19■□□□□ 0.63
USF2-202ENST00000343550 CD19P15391 556 aa19■□□□□ 0.63
USF2-202ENST00000343550 HOXC13P31276 330 aa19■□□□□ 0.63
USF2-202ENST00000343550 ZNF132P52740 706 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms