RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CDO1Q16878 200 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PPM1LQ5SGD2 360 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CHSY1Q86X52 802 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 XXYLT1Q8NBI6 393 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CABLES1Q8TDN4 633 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZIM3Q96PE6 472 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 THUMPD3Q9BV44 507 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 EMILIN2Q9BXX0 1053 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TTYH1Q9H313 450 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 MLXIPQ9HAP2 919 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ADAM22Q9P0K1 906 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 HEY2Q9UBP5 337 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ITIH6Q6UXX5 1313 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MROH5Q6ZUA9 1318 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SCGNO76038 276 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 FYNP06241 537 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CHI3L1P36222 383 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 NPTX2P47972 431 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ALDH5A1P51649 535 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 SCN1BQ07699 218 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 DDR1Q08345 913 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ANO4Q32M45 955 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CCNI2Q6ZMN8 369 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 TMEM26Q6ZUK4 368 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ADHFE1Q8IWW8 467 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MS4A14Q96JA4 679 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZBTB3Q9H5J0 574 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SARS2Q9NP81 518 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZNF112Q9UJU3 913 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 UTYO14607 1347 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 KCNN4O15554 427 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 UFL1O94874 794 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 DHFRP00374 187 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 MAGEA4P43358 317 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 DGCR6Q14129 220 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 PDK3Q15120 406 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ZNF605Q86T29 641 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 KBTBD2Q8IY47 623 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 RNF139Q8WU17 664 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 GAL3ST3Q96A11 431 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 UQCC2Q9BRT2 126 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 TASP1Q9H6P5 420 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 METTL8Q9H825 291 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 CROTQ9UKG9 612 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ZNF451Q9Y4E5 1061 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 PTGES3LE9PB15 166 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 CLOCKO15516 846 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 MMP1P03956 469 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ITGALP20701 1170 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 SLC5A9Q2M3M2 681 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 DENND5AQ6IQ26 1287 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ZNF574Q6ZN55 896 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 RAB11FIP2Q7L804 512 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ZBTB8BQ8NAP8 495 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 UGT2B28Q9BY64 529 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 CAB39LQ9H9S4 337 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 RNF123Q5XPI4 1314 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 TTLL13PA6NNM8 815 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ATG7O95352 703 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 BMP10O95393 424 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 FOSP01100 380 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 FDPSP14324 419 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 ZNF14P17017 642 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 LBPP18428 481 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 TCEAL5Q5H9L2 206 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 GCNAQ96QF7 691 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 RBM12Q9NTZ6 932 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 SRPRBQ9Y5M8 271 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 LTN1O94822 1766 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 FAM228BP0C875 321 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 CNTFP26441 200 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 SDC2P34741 201 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 CPA2P48052 419 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 CBFBQ13951 182 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 FAM47AQ5JRC9 791 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 SMIM5Q71RC9 77 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ARID3BQ8IVW6 561 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 C4orf33Q8N1A6 199 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 DRAXINQ8NBI3 349 aaPredicted RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 PPP1R14AQ96A00 147 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 NLRP3Q96P20 1036 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 TBC1D24Q9ULP9 559 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 MED13Q9UHV7 2174 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 PRPF3O43395 683 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 TRMUO75648 421 aaKnown RBP6.34□□□□□ -1.39
VCAN-203ENST00000343200 PGK2P07205 417 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 PACS1Q6VY07 963 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 C10orf107Q8IVU9 208 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 GLG1Q92896 1179 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 FUT8Q9BYC5 575 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 EPB41L4BQ9H329 900 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 LRRC4Q9HBW1 653 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 PTTG2Q9NZH5 202 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 WDR17Q8IZU2 1322 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 M0R036 132 aa6.34□□□□□ -1.39
VCAN-203ENST00000343200 ORC5O43913 435 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms