RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 KIAA1257Q9ULG3 409 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CEMIPQ8WUJ3 1361 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 DYTNA2CJ06 578 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 KRT1P04264 644 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 COX7A2P14406 83 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CYP11B2P19099 503 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 RPP38P78345 283 aaKnown RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SLC12A1Q13621 1099 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 USP45Q70EL2 814 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 KBTBD6Q86V97 674 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CEP120Q8N960 986 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 DEPDC7Q96QD5 511 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 EPS8L2Q9H6S3 715 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SIRPGQ9P1W8 387 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 POTECB2RU33 542 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 RASGRF2O14827 1237 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 KERAO60938 352 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 GUCY1A2P33402 732 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 LIG3P49916 1009 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 UCNP55089 124 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 BNC1Q01954 994 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 TPSD1Q9BZJ3 242 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 KIF17Q9P2E2 1029 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 PDS5AQ29RF7 1337 aaKnown RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 PSMA3P25788 255 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 ABRQ12979 859 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 MLF2Q15773 248 aaPredicted RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 LRRC26Q2I0M4 334 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 POTEEQ6S8J3 1075 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CHST9Q7L1S5 443 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 LUZP2Q86TE4 346 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SFR1Q86XK3 245 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SMARCD2Q92925 531 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 NXPE2Q96DL1 559 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 C16orf45Q96MC5 204 aaPredicted RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 ZFP42Q96MM3 310 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 USP15Q9Y4E8 981 aaPredicted RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 YKT6O15498 198 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 ACTN4O43707 911 aaKnown RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 ALAS2P22557 587 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CES1P23141 567 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CDC25AP30304 524 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 CCR1P32246 355 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 SHMT1P34896 483 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 RAB43Q86YS6 212 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 NAP1L5Q96NT1 182 aaPredicted RBP8.74□□□□□ -1.01
HMGB1-203ENST00000341423 BRINP2Q9C0B6 783 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 ASB7Q9H672 318 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 TASP1Q9H6P5 420 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 AIPL1Q9NZN9 384 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 PCDHA2Q9Y5H9 948 aa8.74□□□□□ -1.01
HMGB1-203ENST00000341423 C2orf81A6NN90 581 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 ALOX15P16050 662 aaPredicted RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 MAT2AP31153 395 aaKnown RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 CNR2P34972 360 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 RCAN1P53805 252 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 SLC44A4Q53GD3 710 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 KDM7AQ6ZMT4 941 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 CERS5Q8N5B7 392 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 COLGALT1Q8NBJ5 622 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 GOT1L1Q8NHS2 421 aaPredicted RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 MAGEC3Q8TD91 643 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 C2orf15Q8WU43 125 aaKnown RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 NELFBQ8WX92 580 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 TMEM159Q96B96 161 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 SMC6Q96SB8 1091 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 BAG1Q99933 345 aaPredicted RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 SNX6Q9UNH7 406 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 ASXL3Q9C0F0 2248 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 URADA6NGE7 173 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 POTEMA6NI47 508 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 ACKR2O00590 384 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 FESP07332 822 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 BMP4P12644 408 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 GNA15P30679 374 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 MAP3K7CLP57077 242 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 GRM3Q14832 879 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 CENPPQ6IPU0 288 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 SHQ1Q6PI26 577 aaKnown RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 TMC6Q7Z403 805 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 MR1Q95460 341 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 LENG9Q96B70 501 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 SERAC1Q96JX3 654 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 TSPAN18Q96SJ8 248 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 GPR174Q9BXC1 333 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 OSGEPQ9NPF4 335 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 ITGA11Q9UKX5 1188 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 FHOD1Q9Y613 1164 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 CLTCL1P53675 1640 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 NCANO14594 1321 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 PLGP00747 810 aaPredicted RBP8.73□□□□□ -1.01
HMGB1-203ENST00000341423 RFX3P48380 749 aa8.73□□□□□ -1.01
HMGB1-203ENST00000341423 GCLMP48507 274 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms