RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 AMHR2Q16671 573 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 SLC9A9Q8IVB4 645 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 CARD9Q9H257 536 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 DHX35Q9H5Z1 703 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 XPO7Q9UIA9 1087 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SUGP1Q8IWZ8 645 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 OLIG1Q8TAK6 271 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 LNX1Q8TBB1 728 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 APOL2Q9BQE5 337 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 KATNAL1Q9BW62 490 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 GCOM2Q9BZD3 368 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 FBXO6Q9NRD1 293 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PAPOLBQ9NRJ5 636 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 ANKRD12Q6UB98 2062 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 TRIM49D1C9J1S8 452 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 FSBPO95073 299 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 IQCF3P0C7M6 154 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SMIM10L2AP0DMW4 78 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SMIM10L2BP0DMW5 78 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 RBP3P10745 1247 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 NELFEP18615 380 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 DRD4P21917 467 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 BPIFB4P59827 614 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SKOR1P84550 965 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 LMNB2Q03252 620 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PTK7Q13308 1070 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 CHI3L2Q15782 390 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SPRED3Q2MJR0 410 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 CCDC14Q49A88 953 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 ST13P4Q8IZP2 240 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 NDUFAF2Q8N183 169 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 USP6NLQ92738 828 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 GJD2Q9UKL4 321 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 ANK1P16157 1881 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 TTC36A6NLP5 189 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 KIF1CO43896 1103 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 KRT37O76014 449 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 HOXC6P09630 235 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRLRP16471 622 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 ACAP1Q15027 740 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 FIGNQ5HY92 759 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 TCHHL1Q5QJ38 904 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 CES3Q6UWW8 571 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 DNAJB3Q8WWF6 145 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 SH3GL3Q99963 347 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 TRPV6Q9H1D0 765 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 PRMT7Q9NVM4 692 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 GTSE1Q9NYZ3 720 aa10.87□□□□□ -0.67
CAPRIN1-201ENST00000341394 M0QYV0 167 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 B4GALT5O43286 388 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 SMNDC1O75940 238 aaKnown RBP eCLIP10.86□□□□□ -0.671e-7■■□□□ 13.3
CAPRIN1-201ENST00000341394 EXOC3L1Q86VI1 746 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 TRIB2Q92519 343 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 HHIPL1Q96JK4 782 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 TMEM134Q9H6X4 195 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 VCX3AQ9NNX9 186 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 ZFATQ9P243 1243 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 ANGPTL2Q9UKU9 493 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 RBM47A0AV96 593 aaKnown RBP10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 C17orf102A2RUQ5 167 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 C22orf31O95567 290 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 TYK2P29597 1187 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 GTF2H1P32780 548 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 RPA3P35244 121 aaPredicted RBP10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 NME5P56597 212 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 CYP24A1Q07973 514 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 KPNB1Q14974 876 aaKnown RBP10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 OR6B3Q8NGW1 331 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 SPATA18Q8TC71 538 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 ACTRT1Q8TDG2 376 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 CCT6BQ92526 530 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 SEMA4DQ92854 862 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 OSMRQ99650 979 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 SH3GL2Q99962 352 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 GRIN2DO15399 1336 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 CTSHP09668 335 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 VEGFBP49765 207 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 BCAR1P56945 870 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 OCRLQ01968 901 aa10.86□□□□□ -0.67
CAPRIN1-201ENST00000341394 TRIM32Q13049 653 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms