RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 CHORDC1Q9UHD1 332 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-201ENST00000340748 SRP72O76094 671 aaKnown RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 CAVIN3Q969G5 261 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 WEE1P30291 646 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 RAB30Q15771 203 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 FBXO46Q6PJ61 603 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 CLTBP09497 229 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 CREMQ03060 361 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 ITIH4Q14624 930 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 LRRC23Q53EV4 343 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 CEP68Q76N32 757 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF410Q86VK4 478 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 MFN1Q8IWA4 741 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 SLC5A5Q92911 643 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 PNMA5Q96PV4 448 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 MAP4P27816 1152 aaKnown RBP13.3□□□□□ -0.28
DNMT1-201ENST00000340748 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 GEMP55040 296 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 HDAC4P56524 1084 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 STARD3Q14849 445 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 NSL1Q96IY1 281 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 AP5Z1O43299 807 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 F9P00740 461 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 AKAP5P24588 427 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 AXLP30530 894 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 TMED1Q13445 227 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 GTF2H3Q13889 308 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 SEZ6Q53EL9 994 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 FAM167BQ9BTA0 163 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
DNMT1-201ENST00000340748 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CCNG2Q16589 344 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SYTL3Q4VX76 610 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 ZNF669Q96BR6 464 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 MAGEB18Q96M61 343 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SCHIP1Q9P0W5 487 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 RWDD3Q9Y3V2 267 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SUPT3HO75486 399 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 FBXO21O94952 628 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 RGS4P49798 205 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 PMS1P54277 932 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CCDC149Q6ZUS6 474 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 RFX8Q6ZV50 586 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 ABTB1Q969K4 478 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 FOPNLQ96NB1 174 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CHCHD3Q9NX63 227 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TRIM49D1C9J1S8 452 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 M0QYT0 321 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SLC10A3P09131 477 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 BCAT1P54687 386 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CDH18Q13634 790 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 PCSK7Q16549 785 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TAS1R2Q8TE23 839 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 WDCPQ9H6R7 721 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 STX18Q9P2W9 335 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 L1RE1Q9UN81 338 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 GLRA3O75311 464 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 CD52P31358 61 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 PTK2BQ14289 1009 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 THEMIS2Q5TEJ8 643 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 SLC25A41Q8N5S1 370 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
DNMT1-201ENST00000340748 OR9Q1Q8NGQ5 310 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 DCDC2Q9UHG0 476 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
DNMT1-201ENST00000340748 TRPC5OSA6NMA1 111 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 SEC24CP53992 1094 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 TBC1D19Q8N5T2 526 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 TEX9Q8N6V9 391 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 RMDN2Q96LZ7 410 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 PDGFCQ9NRA1 345 aa13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-201ENST00000340748 CXCL14O95715 111 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms