RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FOSL2P15408 326 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 SLCO1A2P46721 670 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 RGS4P49798 205 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 TRIM32Q13049 653 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 ACOX1Q15067 660 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 ECHDC2Q86YB7 292 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 FLCNQ8NFG4 579 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 PTPRN2Q92932 1015 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 HHIPL1Q96JK4 782 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 SYN3O14994 580 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 TBL1XO60907 577 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 NFATC1O95644 943 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 COMTP21964 271 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 PTK2BQ14289 1009 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 LBRQ14739 615 aaKnown RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 TBC1D1Q86TI0 1168 aaPredicted RBP13.3□□□□□ -0.28
LIN54-201ENST00000340417 ZNF510Q9Y2H8 683 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 PCDHB9Q9Y5E1 797 aa13.3□□□□□ -0.28
LIN54-201ENST00000340417 A0A1W2PQJ5 194 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 MYO1DO94832 1006 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 C8AP07357 584 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SLC7A5Q01650 507 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 BRD3Q15059 726 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 TMEM63BQ5T3F8 832 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 OSBPL8Q9BZF1 889 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 RBAK-RBAKDNI3L0D1 243 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 TBC1D4O60343 1298 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SPATA31C1P0DKV0 1188 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ARHGAP25P42331 645 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 IZUMO3Q5VZ72 239 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 CASP10Q92851 521 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ZFATQ9P243 1243 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 VANGL2Q9ULK5 521 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SMIM24O75264 130 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 OR4Q2P0C623 313 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 CSE1LP55060 971 aaKnown RBP13.29□□□□□ -0.28
LIN54-201ENST00000340417 LINC00523Q86TU6 105 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 NAT16Q8N8M0 369 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ATL2Q8NHH9 583 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 PDZD7Q9H5P4 517 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 NRIP1P48552 1158 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 IL9RQ01113 521 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 KLHL38Q2WGJ6 581 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
LIN54-201ENST00000340417 TTI2Q6NXR4 508 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ZBED8Q8IZ13 594 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 SNF8Q96H20 258 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ERGIC2Q96RQ1 377 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 RAD9AQ99638 391 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ZDHHC6Q9H6R6 413 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ZFP14Q9HCL3 533 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 PAK5Q9P286 719 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ARHGAP10A1A4S6 786 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
LIN54-201ENST00000340417 CLCNKBP51801 687 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 KCNT1Q5JUK3 1230 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 MCUR1Q96AQ8 359 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ZBTB18Q99592 522 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
LIN54-201ENST00000340417 USP18Q9UMW8 372 aa13.29□□□□□ -0.28
LIN54-201ENST00000340417 ARIH2O95376 493 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CHRM3P20309 590 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 PRKCQQ04759 706 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 KCNA1Q09470 495 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CALML6Q8TD86 181 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TBC1D14Q9P2M4 693 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CYP2A6P11509 494 aaPredicted RBP13.28□□□□□ -0.28
LIN54-201ENST00000340417 GCNT1Q02742 428 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
LIN54-201ENST00000340417 ATAD1Q8NBU5 361 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 SYN2Q92777 582 aaPredicted RBP13.28□□□□□ -0.28
LIN54-201ENST00000340417 HPSEQ9Y251 543 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 NR2E1Q9Y466 385 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 B4GALT4O60513 344 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 C22orf31O95567 290 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 EPHB4P54760 987 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TKTL2Q9H0I9 626 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TLR5O60602 858 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 RBP3P10745 1247 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TMPRSS15P98073 1019 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 MFSD4BQ5TF39 518 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
LIN54-201ENST00000340417 CELF6Q96J87 481 aaKnown RBP13.28□□□□□ -0.28
LIN54-201ENST00000340417 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
LIN54-201ENST00000340417 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms