RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 CD101Q93033 1021 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 MARK4Q96L34 752 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 SPATC1LQ9H0A9 340 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 PTPRHQ9HD43 1115 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 ZFATQ9P243 1243 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 SMG5Q9UPR3 1016 aaKnown RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 TCRBV9S1A1TA0A576 114 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 WDR27A2RRH5 827 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 HSPA4LO95757 839 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 SKIP12755 728 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 SERPINB4P48594 390 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 CA9Q16790 459 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 LACTB2Q53H82 288 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 E2F7Q96AV8 911 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 DDX56Q9NY93 547 aaKnown RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 LRP5O75197 1615 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 ASS1P00966 412 aaKnown RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 GNL1P36915 607 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 IRX1P78414 480 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 VWA5B1Q5TIE3 1220 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 SIX6OS1Q8N1H7 587 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 FAM13CQ8NE31 585 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 C18orf25Q96B23 403 aaPredicted RBP12.4□□□□□ -0.42
USP1-201ENST00000339950 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 NT5C1AQ9BXI3 368 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 CDT1Q9H211 546 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
USP1-201ENST00000339950 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 SPECC1L-ADORA2AF8WAN1 911 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 CLDN5O00501 218 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 MGRN1O60291 552 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 KRT38O76015 456 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 UNC5CO95185 931 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ADCYAP1R1P41586 468 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 STX3Q13277 289 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 MPZL3Q6UWV2 235 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 CEP70Q8NHQ1 597 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 ZNF669Q96BR6 464 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 NAF1Q96HR8 494 aaKnown RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 AVENQ9NQS1 362 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 GSTA1P08263 222 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 EFNA5P52803 228 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 MGAT5Q09328 741 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 FAM183BPQ6ZVS7 135 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 MFHAS1Q9Y4C4 1052 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PPEF2O14830 753 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 GNAT1P11488 350 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 CDKN2BP42772 138 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 SLC12A1Q13621 1099 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PCSK7Q16549 785 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PPM1JQ5JR12 505 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ZNF772Q68DY9 489 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 SYDE1Q6ZW31 735 aaPredicted RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 CMC1Q7Z7K0 106 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PNPLA1Q8N8W4 532 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 FBXO41Q8TF61 875 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 SERAC1Q96JX3 654 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 NMUR2Q9GZQ4 415 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 PCDH9Q9HC56 1237 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 ZNF358Q9NW07 568 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 DNAJC16Q9Y2G8 782 aa12.39□□□□□ -0.43
USP1-201ENST00000339950 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
USP1-201ENST00000339950 MAP3K7O43318 606 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 TSPAN3O60637 253 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 DNAJC6O75061 913 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 CASP2P42575 452 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 BST1Q10588 318 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 IER5Q5VY09 327 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 SNX31Q8N9S9 440 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 TIPINQ9BVW5 301 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 DENND2DQ9H6A0 471 aaPredicted RBP12.38□□□□□ -0.43
USP1-201ENST00000339950 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
USP1-201ENST00000339950 NVLO15381 856 aaKnown RBP12.38□□□□□ -0.43
USP1-201ENST00000339950 TFE3P19532 575 aaPredicted RBP12.38□□□□□ -0.43
USP1-201ENST00000339950 IVDP26440 423 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 RFC5P40937 340 aa12.38□□□□□ -0.43
USP1-201ENST00000339950 SULT1E1P49888 294 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms