RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 FAM58BPP0C7Q3 252 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 COL6A2P12110 1019 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ITGAXP20702 1163 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 RPL22P35268 128 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 CDK9P50750 372 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 SNAP25P60880 206 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 RELAQ04206 551 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ACAP1Q15027 740 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 PDCD4Q53EL6 469 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 PLA2G4FQ68DD2 849 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 CBWD2Q8IUF1 395 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 DEFB107AQ8IZN7 70 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 POMGNT1Q8WZA1 660 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TMIGD2Q96BF3 282 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ZNF778Q96MU6 729 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 BIRC8Q96P09 236 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GPR101Q96P66 508 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ACCSQ96QU6 501 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 RSL24D1Q9UHA3 163 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ZNF180Q9UJW8 692 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 FAF1Q9UNN5 650 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 NR2E3Q9Y5X4 410 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 hCG_1818297A0A087WSY0 165 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TRIM49D1C9J1S8 452 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ADCY3O60266 1144 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 KRT1P04264 644 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 PDGFRBP09619 1106 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ZNF76P36508 570 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ELK3P41970 407 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GJA8P48165 433 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ENTPD1P49961 510 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 CDKL1Q00532 357 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GRAPQ13588 217 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TXNRD3NBQ6F5E7 133 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 AMIGO2Q86SJ2 522 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TAB3Q8N5C8 712 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 FBXL13Q8NEE6 735 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GIPC3Q8TF64 312 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TFB1MQ8WVM0 346 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 CCDC127Q96BQ5 260 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 ABHD8Q96I13 439 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 C11orf70Q9BRQ4 267 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 SLC2A11Q9BYW1 496 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 CYP4F11Q9HBI6 524 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TMEM8AQ9HCN3 771 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 MRPL47Q9HD33 250 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TOPORSQ9NS56 1045 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TMOD2Q9NZR1 351 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 SAE1Q9UBE0 346 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 GNEQ9Y223 722 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CBFA2T3O75081 653 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SIN3BO75182 1162 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 RFPL1O75677 317 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SERPINB2P05120 415 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 BPGMP07738 259 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 ALOX15P16050 662 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 HOXA13P31271 388 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CDKN2BP42772 138 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 ALDH3B2P48448 385 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 NAA20P61599 178 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 TGFBIQ15582 683 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CCDC92Q53HC0 331 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 C6orf52Q5T4I8 152 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 TTC39BQ5VTQ0 682 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 PDIK1LQ8N165 341 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 RAB3IL1Q8TBN0 382 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 PPP4R1Q8TF05 950 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CSRNP1Q96S65 589 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 MMP19Q99542 508 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 OSBPL6Q9BZF3 934 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SHCBP1LQ9BZQ2 653 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 RRN3Q9NYV6 651 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SPATA7Q9P0W8 599 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 EFR3BQ9Y2G0 817 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 PCDHB2Q9Y5E7 798 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CAPNS1P04632 268 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 WEE2P0C1S8 567 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 MAPTP10636 758 aaKnown RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SHMT1P34896 483 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 PTPN7P35236 360 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 HALP42357 657 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 ECE1P42892 770 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 CCR3P51677 355 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 RPL7AP62424 266 aaKnown RBP9.75□□□□□ -0.85
NECAP1-201ENST00000339754 STX3Q13277 289 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SPIDRQ14159 915 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SLC27A3Q5K4L6 730 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 GRAMD4Q6IC98 578 aa9.75□□□□□ -0.85
NECAP1-201ENST00000339754 SLC26A11Q86WA9 606 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms