RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
RIOK3-201ENST00000339486 GRIP2Q9C0E4 1043 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 LRP6O75581 1613 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 EFNA5P52803 228 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 UGCGQ16739 394 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 PHF13Q86YI8 300 aaPredicted RBP12.91□□□□□ -0.34
RIOK3-201ENST00000339486 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 PIWIL2Q8TC59 973 aaKnown RBP12.91□□□□□ -0.34
RIOK3-201ENST00000339486 FAM151AQ8WW52 585 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 CPT1BQ92523 772 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 CD101Q93033 1021 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 AURKCQ9UQB9 309 aa12.91□□□□□ -0.34
RIOK3-201ENST00000339486 APOC4-APOC2K7ER74 178 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 APOC2P02655 101 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 STAT5BP51692 787 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 HDAC4P56524 1084 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 PDK3Q15120 406 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 OASLQ15646 514 aaKnown RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 BOLA3Q53S33 107 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 LRRC38Q5VT99 294 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 RNF135Q8IUD6 432 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 LRRN4Q8WUT4 740 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 USP6NLQ92738 828 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 ZNF669Q96BR6 464 aaPredicted RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 ZNF70Q9UC06 446 aaPredicted RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 RABGEF1Q9UJ41 708 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 RPS6KL1Q9Y6S9 549 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 CCDC189A1A4V9 331 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 CYB561D2O14569 222 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 RTN3O95197 1032 aaPredicted RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 PMLP29590 882 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 HIRAP54198 1017 aaPredicted RBP12.9□□□□□ -0.34
RIOK3-201ENST00000339486 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 LAYNQ6UX15 382 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 LRRC71Q8N4P6 559 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 FAM49BQ9NUQ9 324 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 COMMD3-BMI1R4GMX3 469 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 UMODL1Q5DID0 1318 aa12.9□□□□□ -0.34
RIOK3-201ENST00000339486 TMEM191CA6NGB0 347 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 TBC1D12O60347 775 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 APOEP02649 317 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 ZFXP17010 805 aaPredicted RBP12.9□□□□□ -0.35
RIOK3-201ENST00000339486 RBL1P28749 1068 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 KIF19Q2TAC6 998 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 DCAF15Q66K64 600 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 OR5B17Q8NGF7 314 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.35
RIOK3-201ENST00000339486 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.35
RIOK3-201ENST00000339486 KAT6AQ92794 2004 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 STRNO43815 780 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 TM7SF2O76062 418 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 APBA3O96018 575 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 SPRP35270 261 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 CDH8P55286 799 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MON1BQ7L1V2 547 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 EXT2Q93063 718 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 NRDE2Q9H7Z3 1164 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MYH3P11055 1940 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 THRAP10827 490 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 CPA3P15088 417 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MMRN1Q13201 1228 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 LMO3Q8TAP4 145 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 CCDC138Q96M89 665 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 LYPLA1O75608 230 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 SERPINE1P05121 402 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 LCP1P13796 627 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 PSMC3P17980 439 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 GRK2P25098 689 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ADORA2BP29275 332 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 NEK3P51956 506 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 CHN2P52757 468 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ITKQ08881 620 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 KRT72Q14CN4 511 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ACBD5Q5T8D3 534 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MTHFD1LQ6UB35 978 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 TRIM67Q6ZTA4 783 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 MRPL46Q9H2W6 279 aaKnown RBP12.89□□□□□ -0.35
RIOK3-201ENST00000339486 SNX25Q9H3E2 840 aa12.89□□□□□ -0.35
RIOK3-201ENST00000339486 DCDC2Q9UHG0 476 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms