RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
RAB6A-202ENST00000336083 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 CDH22Q9UJ99 828 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 POMPQ9Y244 141 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 MAD1L1Q9Y6D9 718 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
RAB6A-202ENST00000336083 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ITM2AO43736 263 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.347e-6■■■■■ 33.7
RAB6A-202ENST00000336083 VNN1O95497 513 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TFAP2AP05549 437 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 GK3PQ14409 553 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TAF5Q15542 800 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ZACNQ401N2 412 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 MAP3K21Q5TCX8 1036 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 EMC1Q8N766 993 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 SPATA18Q8TC71 538 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TMEM174Q8WUU8 243 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 FBXL18Q96ME1 805 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 TMOD2Q9NZR1 351 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ZC3H7BQ9UGR2 993 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 APOBEC2Q9Y235 224 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 SDR42E2A6NKP2 422 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 MCF2LO15068 1137 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 RPL5P46777 297 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 LIG4P49917 911 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 MTMR1Q13613 665 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ADGRG6Q86SQ4 1221 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 MAP7D3Q8IWC1 876 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 METTL25Q8N6Q8 603 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
RAB6A-202ENST00000336083 RAB6BQ9NRW1 208 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 SIRPGQ9P1W8 387 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
RAB6A-202ENST00000336083 ATP9BO43861 1147 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 SERPINB2P05120 415 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.35
RAB6A-202ENST00000336083 KCNA4P22459 653 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.35
RAB6A-202ENST00000336083 FDFT1P37268 417 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 ADARP55265 1226 aaKnown RBP12.9□□□□□ -0.35
RAB6A-202ENST00000336083 CNGA3Q16281 694 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 DBN1Q16643 649 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 LRRC38Q5VT99 294 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 KCTD6Q8NC69 237 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 ZFP28Q8NHY6 868 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 MIPOL1Q8TD10 442 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 C1orf21Q9H246 121 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 PPME1Q9Y570 386 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 TEX264Q9Y6I9 313 aa12.9□□□□□ -0.35
RAB6A-202ENST00000336083 RGL2O15211 777 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 RFPL1O75677 317 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 STAM2O75886 525 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 IL1BP01584 269 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 AOC1P19801 751 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
RAB6A-202ENST00000336083 ALDH1A3P47895 512 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
RAB6A-202ENST00000336083 ZBTB41Q5SVQ8 909 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 NFIBO00712 420 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 C4BPAP04003 597 aaKnown RBP12.89□□□□□ -0.35
RAB6A-202ENST00000336083 CALB1P05937 261 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 BPGMP07738 259 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 PCSK6P29122 969 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 TBL3Q12788 808 aaKnown RBP12.89□□□□□ -0.35
RAB6A-202ENST00000336083 TBCCQ15814 346 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 LGSNQ5TDP6 509 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 GPAT2Q6NUI2 795 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 KLC3Q6P597 504 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 ANO5Q75V66 913 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 JOSD2Q8TAC2 188 aa12.89□□□□□ -0.35
RAB6A-202ENST00000336083 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms