RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PPP1R2P1Q96PQ5 205 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 MED15Q96RN5 788 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 PRR23AA6NEV1 266 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CCDC182A6NF36 153 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 UBDO15205 165 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 INPP4BO15327 924 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CPA3P15088 417 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 EPB42P16452 691 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 TSNQ15631 228 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 NRF1Q16656 503 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 QRICH1Q2TAL8 776 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 MZT2BQ6NZ67 158 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SAPCD2Q86UD0 394 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 UBA3Q8TBC4 463 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ACTRT1Q8TDG2 376 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 TRPC4APQ8TEL6 797 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SPATA16Q9BXB7 569 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RGS18Q9NS28 235 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RPS6KL1Q9Y6S9 549 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ZC3H4Q9UPT8 1303 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SLCO1B7G3V0H7 640 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RIPK2O43353 540 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CDH3P22223 829 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 GTF2H1P32780 548 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 TSC22D1Q15714 1073 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ACAD10Q6JQN1 1059 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 GPAT2Q6NUI2 795 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ZFP1Q6P2D0 407 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FOXP4Q8IVH2 680 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 IZUMO1Q8IYV9 350 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CYP4Z2PQ8N1L4 340 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 PPP1R14AQ96A00 147 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FAM120BQ96EK7 910 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CLIC5Q9NZA1 410 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 VAV3Q9UKW4 847 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 RFX7Q2KHR2 1363 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 C21orf2O43822 256 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 LDLRP01130 860 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 IREB2P48200 963 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 EXOSC10Q01780 885 aaKnown RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CCDC153Q494R4 210 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 ZC2HC1CQ53FD0 456 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-201ENST00000334504 TAF8Q7Z7C8 310 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 FBXO25Q8TCJ0 367 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 GIPC3Q8TF64 312 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 CHST12Q9NRB3 414 aa10.11□□□□□ -0.79
COL4A6-201ENST00000334504 SYNMO15061 1565 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PGM3O95394 542 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ALOX15P16050 662 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 BMPR2Q13873 1038 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SUPT20HL1Q3ZLR7 823 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ERGIC2Q96RQ1 377 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 C9orf16Q9BUW7 83 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 DYRK4Q9NR20 520 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ATXN10Q9UBB4 475 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 TRMT6Q9UJA5 497 aaKnown RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 AGRPO00253 132 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PRKCBP05771 671 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ETS2P15036 469 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 CRKP46108 304 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 CCNIQ14094 377 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PDK3Q15120 406 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SGMS1Q86VZ5 419 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PSMA8Q8TAA3 256 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 EHD4Q9H223 541 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 RNPEPL1Q9HAU8 725 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 OPLAHO14841 1288 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ITGA1P56199 1179 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PRMT9Q6P2P2 845 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 MARK2Q7KZI7 788 aaKnown RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 STK32CQ86UX6 486 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SETD9Q8NE22 299 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SLC7A14Q8TBB6 771 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 NUAK2Q9H093 628 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 TCF7L2Q9NQB0 619 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SLC24A2Q9UI40 661 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 ALDH1A3P47895 512 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 DGCR6Q14129 220 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 STILQ15468 1287 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 USP49Q70CQ1 688 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 LINC00523Q86TU6 105 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 NSMCE2Q96MF7 247 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 A0A1W2PRG6 482 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 CACNB3P54284 484 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 EPHA10Q5JZY3 1008 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 TTC27Q6P3X3 843 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 SPATA2LQ8IUW3 424 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-201ENST00000334504 MICALL2Q8IY33 904 aa10.1□□□□□ -0.79
COL4A6-201ENST00000334504 TSPAN14Q8NG11 270 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms