RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 BSPRYQ5W0U4 402 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 MIER3Q7Z3K6 550 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 CRYGNQ8WXF5 182 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ATAD5Q96QE3 1844 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 SMIM31A0A1B0GVY4 71 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 F8W8V4 182 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 TBC1D12O60347 775 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 NCF2P19878 526 aaPredicted RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 CIITAP33076 1130 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF252P-AS1Q0IIN9 211 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 XKR9Q5GH70 373 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 GSDMBQ8TAX9 411 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 CORO1BQ9BR76 489 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 OXCT2Q9BYC2 517 aaPredicted RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 MAGEB5Q9BZ81 275 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 SENP6Q9GZR1 1112 aaPredicted RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 TAGLN3Q9UI15 199 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 XPO7Q9UIA9 1087 aaKnown RBP11.55□□□□□ -0.56
CCDC87-201ENST00000333861 LAMA3Q16787 3333 aa11.55□□□□□ -0.56
CCDC87-201ENST00000333861 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 BPTFQ12830 3046 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 GRAP2O75791 330 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RPL5P46777 297 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 MAPK10P53779 464 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RPL10AP62906 217 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 KRT72Q14CN4 511 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 CCNG2Q16589 344 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RNASEH2BQ5TBB1 312 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 SH3PXD2AQ5TCZ1 1133 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 ITPRIPL1Q6GPH6 555 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 DCUN1D2Q6PH85 259 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 CENPUQ71F23 418 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 FAM156AQ8NDB6 213 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RAB3IL1Q8TBN0 382 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 DCAKDQ8WVC6 231 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 CPT1BQ92523 772 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 UNKQ9C0B0 810 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 BRD8Q9H0E9 1235 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 EIF3DO15371 548 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 CFLARO15519 480 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 ATP9BO43861 1147 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 CST8O60676 142 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 TRMUO75648 421 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 PROSCO94903 275 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 UNGP13051 313 aaPredicted RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 ITGB5P18084 799 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RPL22P35268 128 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 SERPINB8P50452 374 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 VCPP55072 806 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 MYBPC1Q00872 1141 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 DALRD3Q5D0E6 543 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 KRT39Q6A163 491 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 GRAMD4Q6IC98 578 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RHOT1Q8IXI2 618 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 RAVER1Q8IY67 606 aaKnown RBP11.54□□□□□ -0.56
CCDC87-201ENST00000333861 SNX31Q8N9S9 440 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 GIPC3Q8TF64 312 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 MARK4Q96L34 752 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 SLITRK1Q96PX8 696 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 NACC1Q96RE7 527 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 SLX1AQ9BQ83 275 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 TUBB6Q9BUF5 446 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 UVRAGQ9P2Y5 699 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 DTNAQ9Y4J8 743 aa11.54□□□□□ -0.56
CCDC87-201ENST00000333861 MYH9P35579 1960 aaKnown RBP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 FGFR3P22607 806 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SOX11P35716 441 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 GRM2Q14416 872 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF362Q5T0B9 420 aaPredicted RBP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 CC2D2BQ6DHV5 1058 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 ILDR2Q71H61 639 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 PODNQ7Z5L7 613 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SLC15A3Q8IY34 581 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 DEFB107AQ8IZN7 70 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 FBXL13Q8NEE6 735 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 USP13Q92995 863 aaPredicted RBP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 ACCSQ96QU6 501 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 IQCGQ9H095 443 aaKnown RBP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 VPS11Q9H270 941 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 APOBEC3GQ9HC16 384 aaKnown RBP11.53□□□□□ -0.56
CCDC87-201ENST00000333861 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SELENONQ9NZV5 590 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 GOLGA8QA0A0J9YX86 632 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 GOLGA8OA6NCC3 632 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 GOLGA8NF8WBI6 632 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SRGAP2CP0DJJ0 459 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
CCDC87-201ENST00000333861 RBP3P10745 1247 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms