RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 NOL3O60936 208 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 C21orf59P57076 290 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 GAD2Q05329 585 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PTK6Q13882 451 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 UBAP2LQ14157 1087 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 ANKRD20A4Q4UJ75 823 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 RHOT1Q8IXI2 618 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 CPNE9Q8IYJ1 553 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 TMEM109Q9BVC6 243 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 APOEP02649 317 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 ADSSP30520 456 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SLC5A2P31639 672 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 LIG4P49917 911 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 RPL7AP62424 266 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 CYP1B1Q16678 543 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 RALGPS1Q5JS13 557 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 ANKS1BQ7Z6G8 1248 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 TCP10LQ8TDR4 215 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 COX4I2Q96KJ9 171 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PPP1R36Q96LQ0 422 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 AASDHPPTQ9NRN7 309 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SLC17A7Q9P2U7 560 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 DSEQ9UL01 958 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 GRID1Q9ULK0 1009 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 EXOC7Q9UPT5 735 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 COL14A1Q05707 1796 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 XIRP1Q702N8 1843 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 K7EPI3 171 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 TP73O15350 636 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SLC26A4O43511 780 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 RAD17O75943 681 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 NPTX2P47972 431 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SULT2A1Q06520 285 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PRR23CQ6ZRP0 262 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 AGR3Q8TD06 166 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 FERMT1Q9BQL6 677 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 SAR1AQ9NR31 198 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 COL20A1Q9P218 1284 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 LAMB2P55268 1798 aa12.31□□□□□ -0.44
LIMK2-202ENST00000333611 C1orf232A0A0U1RR37 186 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MATN2O00339 956 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 C2CD2LO14523 706 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 EFHC1Q5JVL4 640 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 OXNAD1Q96HP4 312 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 ZNF668Q96K58 619 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 SLX1AQ9BQ83 275 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 TUBB6Q9BUF5 446 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 CNGB3Q9NQW8 809 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 TUBA8Q9NY65 449 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 ARFGEF1Q9Y6D6 1849 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MAST2Q6P0Q8 1798 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 A0A1B0GTW7 788 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 KLHL41O60662 606 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 CBFA2T3O75081 653 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 IVDP26440 423 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 GNA15P30679 374 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 ATICP31939 592 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MAN1A1P33908 653 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 NKX2-5P52952 324 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 NRLP54845 237 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 CDH15P55291 814 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MAP3K10Q02779 954 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MOGSQ13724 837 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 PDK4Q16654 411 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MTERF2Q49AM1 385 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MFSD7Q6UXD7 560 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 PTAR1Q7Z6K3 402 aaPredicted RBP12.3□□□□□ -0.44
LIMK2-202ENST00000333611 NUP93Q8N1F7 819 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MAP3K6O95382 1288 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MT-ND3P03897 115 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 FGFR3P22607 806 aa12.3□□□□□ -0.44
LIMK2-202ENST00000333611 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms