RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 FAM131BQ86XD5 332 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 CBWD2Q8IUF1 395 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 GUF1Q8N442 669 aaKnown RBP10.9□□□□□ -0.66
CLN8-201ENST00000331222 CMTM5Q96DZ9 223 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 RHOBTB2Q9BYZ6 727 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 TMEM8AQ9HCN3 771 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 TBX20Q9UMR3 447 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 SIK3Q9Y2K2 1263 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 COQ6Q9Y2Z9 468 aa10.9□□□□□ -0.66
CLN8-201ENST00000331222 KRT33AO76009 404 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 PLEKP08567 350 aaPredicted RBP10.9□□□□□ -0.67
CLN8-201ENST00000331222 GRK4P32298 578 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 NUP62P37198 522 aaPredicted RBP10.9□□□□□ -0.67
CLN8-201ENST00000331222 GTF2A2P52657 109 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 COX10Q12887 443 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 CSHL1Q14406 222 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 MYO1HQ8N1T3 1032 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 KCNB2Q92953 911 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 DNAJC1Q96KC8 554 aaKnown RBP10.9□□□□□ -0.67
CLN8-201ENST00000331222 WDR19Q8NEZ3 1342 aa10.9□□□□□ -0.67
CLN8-201ENST00000331222 MAP2P11137 1827 aaKnown RBP10.9□□□□□ -0.67
CLN8-201ENST00000331222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 TK2O00142 265 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 TRDMT1O14717 391 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 UGP2Q16851 508 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 DENND1BQ6P3S1 775 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 STRA8Q7Z7C7 330 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SLFN11Q7Z7L1 901 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SAPCD2Q86UD0 394 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 METTL16Q86W50 562 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 CATSPER1Q8NEC5 780 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 LPAR1Q92633 364 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 STAMBPL1Q96FJ0 436 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 RAD21L1Q9H4I0 556 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 AP3B1O00203 1094 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 RBP3P10745 1247 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 FAM171A1Q5VUB5 890 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 OLFM3Q96PB7 478 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 THAP2Q9H0W7 228 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 RHBDL2Q9NX52 303 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 PRKAG3Q9UGI9 489 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 HPS5Q9UPZ3 1129 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 TSC22D4Q9Y3Q8 395 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 C16orf96A6NNT2 1141 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 TRIM13O60858 407 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 WDR36Q8NI36 951 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 USP13Q92995 863 aaPredicted RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 ARL2BPQ9Y2Y0 163 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 IGSF9BQ9UPX0 1349 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 NUMA1Q14980 2115 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 CHD1O14646 1710 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SNRPAP09012 282 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 CLUP10909 449 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 KLRK1P26718 216 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 CSTF3Q12996 717 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 SLC18A3Q16572 532 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SLC25A24Q6NUK1 477 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 HERC6Q8IVU3 1022 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 ATG16L2Q8NAA4 619 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SEPHS2Q99611 448 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 CASZ1Q86V15 1759 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 BAIAP3O94812 1187 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SLC2A4P14672 509 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 PRKAG1P54619 331 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 FIG4Q92562 907 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 E2F7Q96AV8 911 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 SEC16BQ96JE7 1060 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 CALR3Q96L12 384 aaKnown RBP10.89□□□□□ -0.67
CLN8-201ENST00000331222 TMEM121Q9BTD3 319 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 LAMB3Q13751 1172 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 USP7Q93009 1102 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 TRIM17Q9Y577 477 aa10.89□□□□□ -0.67
CLN8-201ENST00000331222 MEI4A8MW99 385 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 TRIM49D1C9J1S8 452 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PDXKO00764 312 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PEX1O43933 1283 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 KLHL41O60662 606 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 NFYCQ13952 458 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 CATSPER2Q96P56 530 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 OMDQ99983 421 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 ELL3Q9HB65 397 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 ADSLP30566 484 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 TLR8Q9NR97 1041 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 RPAP1Q9BWH6 1393 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 SLC37A4O43826 429 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 GHRP10912 638 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 CCDC130P13994 396 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 MDH1P40925 334 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 STK4Q13043 487 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PRKAA1Q13131 559 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms