RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ISLR2Q6UXK2 745 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 TMEM126BQ8IUX1 230 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 WDR75Q8IWA0 830 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 FBXW8Q8N3Y1 598 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 ABHD8Q96I13 439 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 STN1Q9H668 368 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 EXOC7Q9UPT5 735 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 PCDHB2Q9Y5E7 798 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 CCDC195A0A1B0GUA6 201 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 ARHGEF35A5YM69 484 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 TLR3O15455 904 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 SORBS2O94875 1100 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 SPOCD1Q6ZMY3 1216 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 POU5F2Q8N7G0 328 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 MPHOSPH6Q99547 160 aaKnown RBP25.26■■□□□ 1.63
SOX1-201ENST00000330949 CYP4F11Q9HBI6 524 aa25.26■■□□□ 1.63
SOX1-201ENST00000330949 TCRBV9S1A1TA0A576 114 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 FAM155BO75949 473 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 CRKP46108 304 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 TCHHL1Q5QJ38 904 aaPredicted RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 DAW1Q8N136 415 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 ZSWIM2Q8NEG5 633 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 DQX1Q8TE96 717 aaKnown RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 GJD4Q96KN9 370 aaPredicted RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 C11orf70Q9BRQ4 267 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 HAUS8Q9BT25 410 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 ZNF395Q9H8N7 513 aaPredicted RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 ADAMTSL1Q8N6G6 1762 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 CALCAP01258 141 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 MAPTP10636 758 aaKnown RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 ACAT1P24752 427 aaKnown RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 HSPA13P48723 471 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 POTEAQ6S8J7 498 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 HPS6Q86YV9 775 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 SEPT12Q8IYM1 358 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 AMNQ9BXJ7 453 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 COA1Q9GZY4 146 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 BRD8Q9H0E9 1235 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 PCDHGB4Q9UN71 923 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 APOBEC2Q9Y235 224 aaKnown RBP25.25■■□□□ 1.63
SOX1-201ENST00000330949 PCDHGB5Q9Y5G0 923 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 NR2E3Q9Y5X4 410 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 SMCHD1A6NHR9 2005 aa25.25■■□□□ 1.63
SOX1-201ENST00000330949 SPAG6O75602 509 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 KRT37O76014 449 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 ADRB2P07550 413 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 CYP3A4P08684 503 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 PTPN7P35236 360 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 DEFB107AQ8IZN7 70 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 CMTM5Q96DZ9 223 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 IP6K2Q9UHH9 426 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 TRIM49D1C9J1S8 452 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 CDK9P50750 372 aaKnown RBP25.24■■□□□ 1.63
SOX1-201ENST00000330949 PRELPP51888 382 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 SNRPFP62306 86 aaKnown RBP25.24■■□□□ 1.63
SOX1-201ENST00000330949 GCNT1Q02742 428 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 TFDP3Q5H9I0 405 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 CES4AQ5XG92 561 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 POTEHQ6S545 545 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 SLC26A11Q86WA9 606 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 SLC35B2Q8TB61 432 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 CCDC127Q96BQ5 260 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 VCPIP1Q96JH7 1222 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 LRGUKQ96M69 825 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 KCNK16Q96T55 309 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 SENP7Q9BQF6 1050 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 NRDE2Q9H7Z3 1164 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 THAP1Q9NVV9 213 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 RRN3Q9NYV6 651 aa25.24■■□□□ 1.63
SOX1-201ENST00000330949 DENND5BQ6ZUT9 1274 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 MYH9P35579 1960 aaKnown RBP25.23■■□□□ 1.63
SOX1-201ENST00000330949 hCG_1818297A0A087WSY0 165 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 ITM2AO43736 263 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 PSMD10O75832 226 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 MCCD1P59942 119 aaPredicted RBP25.23■■□□□ 1.63
SOX1-201ENST00000330949 STX3Q13277 289 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 TBC1D10BQ4KMP7 808 aaPredicted RBP25.23■■□□□ 1.63
SOX1-201ENST00000330949 PLEKHA7Q6IQ23 1121 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 TAS1R2Q8TE23 839 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 APBB2Q92870 758 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 PKD2L1Q9P0L9 805 aa25.23■■□□□ 1.63
SOX1-201ENST00000330949 XPO7Q9UIA9 1087 aaKnown RBP25.23■■□□□ 1.63
SOX1-201ENST00000330949 TMEM247A6NEH6 219 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 CFBP00751 764 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 SNRPAP09012 282 aaKnown RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 HOXA10P31260 410 aaPredicted RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 JAG1P78504 1218 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 LRRC38Q5VT99 294 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 RIN3Q8TB24 985 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 LOXHD1Q8IVV2 1947 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 IGLV3-22A0A075B6J6 115 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 GOLGA8IPA6NC78 632 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 GOLGA8JA6NMD2 632 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 HOXD12P35452 270 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 ZYXQ15942 572 aaKnown RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 SNRNP35Q16560 246 aaKnown RBP25.22■■□□□ 1.63
SOX1-201ENST00000330949 LGSNQ5TDP6 509 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 PAOXQ6QHF9 649 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 ARCQ7LC44 396 aa25.22■■□□□ 1.63
SOX1-201ENST00000330949 FBXO11Q86XK2 927 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms