RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CA9Q16790 459 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 ARHGAP17Q68EM7 881 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 ALKAL1Q6UXT8 129 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 IGDCC3Q8IVU1 814 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 PPP1R13LQ8WUF5 828 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 DCAKDQ8WVC6 231 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 RTP4Q96DX8 246 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 RMDN2Q96LZ7 410 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 TBCBQ99426 244 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 OSMRQ99650 979 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 LPIN3Q9BQK8 851 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 SYT17Q9BSW7 474 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 CNTN3Q9P232 1028 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
TPM3-206ENST00000330188 UNCXA6NJT0 531 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 APOL1O14791 398 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 CHADO15335 359 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 HCRTO43612 131 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 KRT4P19013 534 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 ELK3P41970 407 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 FAM182AQ5T1J6 154 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 C9orf57Q5W0N0 161 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 ICE2Q659A1 982 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 SLC9A4Q6AI14 798 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 NOTUMQ6P988 496 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 OR6B3Q8NGW1 331 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 PCDH19Q8TAB3 1148 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 STK32AQ8WU08 396 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 NXF3Q9H4D5 531 aaKnown RBP15.17■□□□□ 0.02
TPM3-206ENST00000330188 RNF19AQ9NV58 838 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 STARD13Q9Y3M8 1113 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 MDM4O15151 490 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 KCNN4O15554 427 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 RECQL4O94761 1208 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 SMIM10L2AP0DMW4 78 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 SMIM10L2BP0DMW5 78 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 TFE3P19532 575 aaPredicted RBP15.17■□□□□ 0.02
TPM3-206ENST00000330188 HDAC4P56524 1084 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 NCALDP61601 193 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 BNIP1Q12981 228 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 PLEKHH3Q7Z736 793 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 FITM2Q8N6M3 262 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 GBP7Q8N8V2 638 aaPredicted RBP15.17■□□□□ 0.02
TPM3-206ENST00000330188 CCDC63Q8NA47 563 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 FAF2Q96CS3 445 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 RXFP1Q9HBX9 757 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 PAK5Q9P286 719 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 TEX264Q9Y6I9 313 aa15.17■□□□□ 0.02
TPM3-206ENST00000330188 A8MXQ7 604 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 DARSP14868 501 aaKnown RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 RBL1P28749 1068 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 MSH2P43246 934 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 BCAR1P56945 870 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ELF3P78545 371 aaPredicted RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 CBLBQ13191 982 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 SYCP2LQ5T4T6 812 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ZNF670Q9BS34 389 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 HEY1Q9Y5J3 304 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 SMIM35A0A1B0GVV1 85 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 BCLAF3A2AJT9 711 aaKnown RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 MBLAC1A4D2B0 266 aaPredicted RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 KBTBD13C9JR72 458 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ZWINTO95229 277 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 F2P00734 622 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 AKAP5P24588 427 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 SNX16P57768 344 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 CDC42EP1Q00587 391 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 HHATQ5VTY9 493 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 LVRNQ6Q4G3 990 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 AGGF1Q8N302 714 aaeCLIP15.16■□□□□ 0.021e-7■□□□□ 11.2
TPM3-206ENST00000330188 C7orf31Q8N865 590 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ANKLE1Q8NAG6 615 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 KBTBD7Q8WVZ9 684 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.027e-32■■■■□ 24.9
TPM3-206ENST00000330188 CYTH2Q99418 400 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 C11orf84Q9BUA3 381 aaPredicted RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ECT2Q9H8V3 914 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 SLCO1B3Q9NPD5 702 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 UBQLN1Q9UMX0 589 aaKnown RBP15.16■□□□□ 0.02
TPM3-206ENST00000330188 NRCAMQ92823 1304 aa15.16■□□□□ 0.02
TPM3-206ENST00000330188 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms