RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CDK7P50613 346 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 TGFB2P61812 414 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 ARHGAP8P85298 464 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 ROR1Q01973 937 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 XKR3Q5GH77 459 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 DEPTORQ8TB45 409 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 LPAR1Q92633 364 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 CFAP36Q96G28 342 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 HBS1LQ9Y450 684 aaKnown RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 CXorf49A8MYA2 514 aaPredicted RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 SNNO75324 88 aaPredicted RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 NR3C2P08235 984 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 ALDH18A1P54886 795 aaKnown RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 MYL6P60660 151 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 LIN52Q52LA3 116 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 FAF2Q96CS3 445 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 PORCNQ9H237 461 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
SSH1-201ENST00000326470 PCSK1NQ9UHG2 260 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 SORCS3Q9UPU3 1222 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 TBC1D30Q9Y2I9 924 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 SLC4A7Q9Y6M7 1214 aa17.4■□□□□ 0.38
SSH1-201ENST00000326470 CYB561D2O14569 222 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 USP1O94782 785 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 KITP10721 976 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 PRKCHP24723 683 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 CPOXP36551 454 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 YWHAZP63104 245 aaKnown RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 SP4Q02446 784 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 WASHC5Q12768 1159 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 LAMB3Q13751 1172 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 SYCP2LQ5T4T6 812 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 ABHD15Q6UXT9 468 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 BRSK2Q8IWQ3 736 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 CENPKQ9BS16 269 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 SLC13A1Q9BZW2 595 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 RSAD1Q9HA92 442 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 ZDHHC7Q9NXF8 308 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 TJP2Q9UDY2 1190 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 SOX13Q9UN79 622 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 A0A088AWK7 358 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 CCDC195A0A1B0GUA6 201 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 RNASEH1O60930 286 aaKnown RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 ITGBL1O95965 494 aaPredicted RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 EDN1P05305 212 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 AOC1P19801 751 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 ACTR2P61160 394 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 PSMC1P62191 440 aaKnown RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 YWHAEP62258 255 aaKnown RBP17.39■□□□□ 0.37
SSH1-201ENST00000326470 NOMO1Q15155 1222 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 TAF5Q15542 800 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 ACAD11Q709F0 780 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 EMC1Q8N766 993 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 RILPQ96NA2 401 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 CALN1Q9BXU9 219 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 C20orf27Q9GZN8 174 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 S100A14Q9HCY8 104 aa17.39■□□□□ 0.37
SSH1-201ENST00000326470 SDR42E2A6NKP2 422 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 HARSP12081 509 aaKnown RBP17.38■□□□□ 0.37
SSH1-201ENST00000326470 MIPP30301 263 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 SLC25A41Q8N5S1 370 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 FAM172AQ8WUF8 416 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 HSPH1Q92598 858 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 LHX5Q9H2C1 402 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 VCX3BQ9H321 246 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 POPDC2Q9HBU9 364 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 VCX3AQ9NNX9 186 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 ZC3H7BQ9UGR2 993 aaKnown RBP17.38■□□□□ 0.37
SSH1-201ENST00000326470 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 A0A1B0GVG6 124 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 BIRC5O15392 142 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 RGS20O76081 388 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 BPGMP07738 259 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
SSH1-201ENST00000326470 UBAP2LQ14157 1087 aaKnown RBP17.38■□□□□ 0.37
SSH1-201ENST00000326470 NPNTQ6UXI9 565 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 RAPH1Q70E73 1250 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 PDSS2Q86YH6 399 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 OR6Y1Q8NGX8 325 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 OLFM3Q96PB7 478 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 EPAS1Q99814 870 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 MTMR12Q9C0I1 747 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 EBF3Q9H4W6 596 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 PLAC1Q9HBJ0 212 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
SSH1-201ENST00000326470 KRT38O76015 456 aa17.37■□□□□ 0.37
SSH1-201ENST00000326470 TRUB2O95900 331 aaKnown RBP17.37■□□□□ 0.37
SSH1-201ENST00000326470 ARL2P36404 184 aa17.37■□□□□ 0.37
SSH1-201ENST00000326470 GRM1Q13255 1194 aa17.37■□□□□ 0.37
SSH1-201ENST00000326470 HIC1Q14526 733 aa17.37■□□□□ 0.37
SSH1-201ENST00000326470 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
SSH1-201ENST00000326470 DHDDSQ86SQ9 333 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms