RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CDH24Q86UP0 819 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 HOMER1Q86YM7 354 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 IFNLR1Q8IU57 520 aaPredicted RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 C5orf34Q96MH7 638 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 CEP89Q96ST8 783 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 PYM1Q9BRP8 204 aaKnown RBP7.15□□□□□ -1.26
CSTF3-201ENST00000323959 ZMYND12Q9H0C1 365 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 ERVMER34-1Q9H9K5 563 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 BRMS1Q9HCU9 246 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 ARHGEF4Q9NR80 690 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 STARD13Q9Y3M8 1113 aa7.15□□□□□ -1.26
CSTF3-201ENST00000323959 GADD45BO75293 160 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 VARSP26640 1264 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CD27P26842 260 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 KRT2P35908 639 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ZNF132P52740 706 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ARL6IP4Q66PJ3 421 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 GATAD2AQ86YP4 633 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 USP28Q96RU2 1077 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SLC12A9Q9BXP2 914 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SLC26A6Q9BXS9 759 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PPM1HQ9ULR3 514 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CCL26Q9Y258 94 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CCDC187A0A096LP49 1063 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PTGESO14684 152 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 THEGLP0DJG4 465 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CPB1P15086 417 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PRPHP41219 470 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ARRB1P49407 418 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ZNF211Q13398 564 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SLC27A1Q6PCB7 646 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 KIAA1324Q6UXG2 1013 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 RNF19BQ6ZMZ0 732 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 STAG2Q8N3U4 1231 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 TCTN2Q96GX1 697 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 MRGPRX1Q96LB2 322 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 EPAS1Q99814 870 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 BPIFA3Q9BQP9 254 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PCDHA6Q9UN73 950 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PCDHA4Q9UN74 947 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 OR6C75A6NL08 312 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 B3GAT3O94766 335 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 TNFSF15O95150 251 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 USP17L7P0C7H9 530 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PFKLP17858 780 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ATP2B1P20020 1258 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CD82P27701 267 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 AKAP17AQ02040 695 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 POU5F1BQ06416 359 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SP5Q6BEB4 398 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 EFCAB13Q8IY85 973 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 FMR1NBQ8N0W7 255 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PHTF2Q8N3S3 785 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 TPCN2Q8NHX9 752 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 RIN3Q8TB24 985 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 BICD2Q8TD16 824 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 PPP1R9BQ96SB3 815 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 NAP1L4Q99733 375 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 ACE2Q9BYF1 805 aaPredicted RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 CACNG4Q9UBN1 327 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 HES2Q9Y543 173 aa7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SRPRBQ9Y5M8 271 aaKnown RBP7.14□□□□□ -1.27
CSTF3-201ENST00000323959 SLC9A3R1O14745 358 aaPredicted RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 SPTLC2O15270 562 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 PLEKHA8P1O95397 391 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 TOB1P50616 345 aaPredicted RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 PDE6CP51160 858 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 EIF3IQ13347 325 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 DHX8Q14562 1220 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 HS1BP3Q53T59 392 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 MOXD1Q6UVY6 613 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 ADAT2Q7Z6V5 191 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 DIS3L2Q8IYB7 885 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 MRPS31Q92665 395 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 GRPEL1Q9HAV7 217 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 ERRFI1Q9UJM3 462 aaPredicted RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 DDX39AO00148 427 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 GRID2O43424 1007 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 AKAP5P24588 427 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 CLK2P49760 499 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 PER3P56645 1201 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 MYBPC2Q14324 1141 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 UPP1Q16831 310 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 SLC35G1Q2M3R5 365 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 MTERF2Q49AM1 385 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 XKR3Q5GH77 459 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 NT5DC1Q5TFE4 455 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 RDM1Q8NG50 284 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 CPT1CQ8TCG5 803 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 ZKSCAN3Q9BRR0 538 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 B3GNT4Q9C0J1 378 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 PTPRHQ9HD43 1115 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 KLK14Q9P0G3 267 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 NOL7Q9UMY1 257 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 PCDHA7Q9UN72 937 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 MAP4K5Q9Y4K4 846 aa7.13□□□□□ -1.27
CSTF3-201ENST00000323959 FN1P02751 2386 aaKnown RBP7.13□□□□□ -1.27
CSTF3-201ENST00000323959 ADGRG4Q8IZF6 3080 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms