RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 NDE1Q9NXR1 346 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 ATXN10Q9UBB4 475 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 PACSIN3Q9UKS6 424 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 PCDHA10Q9Y5I2 948 aa16.69■□□□□ 0.26
CRAT-201ENST00000318080 MT-ND3P03897 115 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 FAM200BP0CF97 657 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 RFC1P35251 1148 aaPredicted RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 VGLL4Q14135 290 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 PRKD1Q15139 912 aaPredicted RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 KBTBD12Q3ZCT8 623 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 MTERF2Q49AM1 385 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 TRIM72Q6ZMU5 477 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 PRPF39Q86UA1 669 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 RASSF3Q86WH2 238 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 SCUBE1Q8IWY4 988 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 RBM12BQ8IXT5 1001 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 JOSD2Q8TAC2 188 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 XPO7Q9UIA9 1087 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 ZNF112Q9UJU3 913 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 AGTPBP1Q9UPW5 1226 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 RIPK3Q9Y572 518 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 CCDC160A6NGH7 325 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 PEX10O60683 326 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 PDE5AO76074 875 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 ELK3P41970 407 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 HMGCS2P54868 508 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 AQP4P55087 323 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 BASP1P80723 227 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 MARK2Q7KZI7 788 aaKnown RBP16.68■□□□□ 0.26
CRAT-201ENST00000318080 ULK2Q8IYT8 1036 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 EMC1Q8N766 993 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 LRRN4Q8WUT4 740 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 NAT14Q8WUY8 206 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 HIC2Q96JB3 615 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
CRAT-201ENST00000318080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.67■□□□□ 0.26
CRAT-201ENST00000318080 CYB561D2O14569 222 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PLA2G6O60733 806 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 WEE2P0C1S8 567 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PTK7Q13308 1070 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 SPDYAQ5MJ70 313 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 GPAT2Q6NUI2 795 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■■□□□ 12.1
CRAT-201ENST00000318080 ZNF398Q8TD17 642 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 ACAP3Q96P50 834 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PHACTR1Q9C0D0 580 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 MMADHCQ9H3L0 296 aaPredicted RBP16.67■□□□□ 0.26
CRAT-201ENST00000318080 SSU72Q9NP77 194 aaKnown RBP16.67■□□□□ 0.26
CRAT-201ENST00000318080 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PCSK1NQ9UHG2 260 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PFDN1O60925 122 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 VAV1P15498 845 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 EPHB1P54762 984 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 PDE1BQ01064 536 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 KRT76Q01546 638 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 BTKQ06187 659 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 SH2D5Q6ZV89 423 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 VCX3BQ9H321 246 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 VCX3AQ9NNX9 186 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 FBXO40Q9UH90 709 aa16.67■□□□□ 0.26
CRAT-201ENST00000318080 TCRBV9S1A1TA0A576 114 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 TM9SF1O15321 606 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 DHRS4L1P0CG22 281 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 PHBP35232 272 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 TNFSF9P41273 254 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 IRX4P78413 519 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 MSLNQ13421 630 aaPredicted RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 RALGPS1Q5JS13 557 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 NPNTQ6UXI9 565 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 TRIM56Q9BRZ2 755 aaKnown RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 CYP26B1Q9NR63 512 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 ANGPTL2Q9UKU9 493 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 HEMK1Q9Y5R4 338 aaPredicted RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 ARHGAP42A6NI28 874 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 RGS20O76081 388 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 PEX2P28328 305 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 SFNP31947 248 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 PRKCEQ02156 737 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 ORC1Q13415 861 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 SUPT20HL1Q3ZLR7 823 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 MCF2L2Q86YR7 1114 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
CRAT-201ENST00000318080 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 RSAD2Q8WXG1 361 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 CENPKQ9BS16 269 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 ADAMTS6Q9UKP5 1117 aa16.66■□□□□ 0.26
CRAT-201ENST00000318080 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms