RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 RFX6Q8HWS3 928 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MAGEB10Q96LZ2 347 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 EPAS1Q99814 870 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CCDC90BQ9GZT6 254 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SLC9A2Q9UBY0 812 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RAD54BQ9Y620 910 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TAF1LQ8IZX4 1826 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PDZK1P1A8MUH7 402 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 WDR64B1ANS9 1081 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MYCP01106 439 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PABPC1P11940 636 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 VCLP18206 1134 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PSMA2P25787 234 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 EPHB1P54762 984 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RRP1BQ14684 758 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HERC3Q15034 1050 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 INSCQ1MX18 579 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CEP78Q5JTW2 689 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 THEMIS2Q5TEJ8 643 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SEL1L3Q68CR1 1132 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SH3RF1Q7Z6J0 888 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CABLES1Q8TDN4 633 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TBCKQ8TEA7 893 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 STARD8Q92502 1023 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ART4Q93070 314 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MRRFQ96E11 262 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ANO3Q9BYT9 981 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NOL6Q9H6R4 1146 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SUCOQ9UBS9 1254 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PCDHA1Q9Y5I3 950 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SPEGQ15772 3267 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 FREM2Q5SZK8 3169 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RALGAPA2Q2PPJ7 1873 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CENPXA8MT69 81 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 H7C1W4 665 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 USP1O94782 785 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DLGAP3O95886 979 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CCNE2O96020 404 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TYK2P29597 1187 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 IL6STP40189 918 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GP5P40197 560 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HARS2P49590 506 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 IFRD2Q12894 506 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 DPY19L2Q6NUT2 758 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ERAP2Q6P179 960 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RAPH1Q70E73 1250 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RP9Q8TA86 221 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 POMGNT1Q8WZA1 660 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MKL1Q969V6 931 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HES6Q96HZ4 224 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 CNDP1Q96KN2 507 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TEX13BQ9BXU2 312 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 BARX2Q9UMQ3 279 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 KLHL20Q9Y2M5 609 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 NR2E3Q9Y5X4 410 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 FOCADQ5VW36 1801 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 IRGMA1A4Y4 181 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SNAP23O00161 211 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ABL1P00519 1130 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 C1QBPQ07021 282 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 PTP4A2Q12974 167 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 BRDTQ58F21 947 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ZC3H12AQ5D1E8 599 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HEATR6Q6AI08 1181 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MTDHQ86UE4 582 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SNIP1Q8TAD8 396 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RASGRP4Q8TDF6 673 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RORBQ92753 470 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GJA10Q969M2 543 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 ATP6V1E2Q96A05 226 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 MRPL48Q96GC5 212 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RTKNQ9BST9 563 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 TRMOQ9BU70 441 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 UBE2OQ9C0C9 1292 aaKnown RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 GANQ9H2C0 597 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RABL2AQ9UBK7 228 aaPredicted RBP4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SEC14L4Q9UDX3 406 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 SLC12A6Q9UHW9 1150 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RABL2BQ9UNT1 228 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 UBR1Q8IWV7 1749 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 HEG1Q9ULI3 1381 aa4.66□□□□□ -1.66
CNOT1-201ENST00000317147 RBM47A0AV96 593 aaKnown RBP4.65□□□□□ -1.66
CNOT1-201ENST00000317147 CCDC154A6NI56 674 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 KPNA3O00505 521 aaPredicted RBP4.65□□□□□ -1.66
CNOT1-201ENST00000317147 AKAP10O43572 662 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 NMT2O60551 498 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 DNAJC6O75061 913 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 DLATP10515 647 aaKnown RBP4.65□□□□□ -1.66
CNOT1-201ENST00000317147 MCAMP43121 646 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 CYP4A11Q02928 519 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 TNFAIP8L3Q5GJ75 292 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 MDH1BQ5I0G3 518 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 CYP4A22Q5TCH4 519 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 TMCO4Q5TGY1 634 aa4.65□□□□□ -1.66
CNOT1-201ENST00000317147 ARHGEF16Q5VV41 709 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms