RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GCATO75600 419 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ABCB4P21439 1286 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 STIP1P31948 543 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 HARS2P49590 506 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ARHGAP1Q07960 439 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 IFFO1Q0D2I5 559 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CCDC38Q502W7 563 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 SPATA21Q7Z572 469 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CNTN4Q8IWV2 1026 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PCDH19Q8TAB3 1148 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CTNNBL1Q8WYA6 563 aaPredicted RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ARHGEF2Q92974 986 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 TOX2Q96NM4 488 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ARL8BQ9NVJ2 186 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 RASGRF2O14827 1237 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 KIAA0355O15063 1070 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ANP32DO95626 131 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CYP2C8P10632 490 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ELF1P32519 619 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 LIMK1P53667 647 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 HMGCS2P54868 508 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CACNB2Q08289 660 aaPredicted RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 SEMA5AQ13591 1074 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PGAP3Q96FM1 320 aaPredicted RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PANX3Q96QZ0 392 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PDLIM1O00151 329 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 TM9SF1O15321 606 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 GSC2O15499 205 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ECEL1O95672 775 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ACVR2AP27037 513 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PDE6CP51160 858 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 APOFQ13790 326 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 CBX2Q14781 532 aaPredicted RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 UBXN11Q5T124 520 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 LCLAT1Q6UWP7 414 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 GRAMD1AQ96CP6 724 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 LARSQ9P2J5 1176 aaKnown RBP8.19□□□□□ -1.1
CNOT4-201ENST00000315544 FRMD4BQ9Y2L6 1034 aa8.19□□□□□ -1.1
CNOT4-201ENST00000315544 ZCWPW2A0A1B0GU75 182 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 KBTBD13C9JR72 458 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 APOC4-APOC2K7ER74 178 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CHADO15335 359 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CCNT2O60583 730 aaKnown RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 APOC2P02655 101 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 KRT10P13645 584 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 HOXB9P17482 250 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CTBSQ01459 385 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 PCLAFQ15004 111 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 WASHC2DQ5SRD0 308 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 RHOT1Q8IXI2 618 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 LSMEM2Q8N112 164 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CNDP1Q96KN2 507 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 GDF15Q99988 308 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 FBXO40Q9UH90 709 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CLEC11AQ9Y240 323 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 GOLGA8IPA6NC78 632 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 GOLGA8JA6NMD2 632 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 PIRO00625 290 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 GABRDO14764 452 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CSH1P0DML2 217 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CSH2P0DML3 217 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CALB2P22676 271 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ABCD1P33897 745 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 KCNC4Q03721 635 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 BAATQ14032 418 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ZYXQ15942 572 aaKnown RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CA9Q16790 459 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ANKRD20A2Q5SQ80 823 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ANKRD20A1Q5TYW2 823 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ANKRD20A3Q5VUR7 823 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 MPP5Q8N3R9 675 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CPSF7Q8N684 471 aaKnown RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ARFGAP2Q8N6H7 521 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ZFAND2BQ8WV99 257 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 TAF4BQ92750 862 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 UBXN10Q96LJ8 280 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 DNAI2Q9GZS0 605 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 PICK1Q9NRD5 415 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 RBAKQ9NYW8 714 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 PHTF1Q9UMS5 762 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 TNFSF13BQ9Y275 285 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 PLLPQ9Y342 182 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 C5orf42Q9H799 3197 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 FAM47DPA6NHR8 397 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 DCLK1O15075 740 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 UGT1A9O60656 530 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 TBX10O75333 385 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CFBP00751 764 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CCND1P24385 295 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ZNF143P52747 638 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-201ENST00000315544 CCNIQ14094 377 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 TEDDM1Q5T9Z0 273 aa8.18□□□□□ -1.1
CNOT4-201ENST00000315544 GKAP1Q5VSY0 366 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms