RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 NET1Q7Z628 596 aaPredicted RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 ZBTB33Q86T24 672 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 SLC25A41Q8N5S1 370 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 ACAP3Q96P50 834 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 CPXM1Q96SM3 734 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 TTC1Q99614 292 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 RPAP3Q9H6T3 665 aaPredicted RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 TTLL3Q9Y4R7 772 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 PPME1Q9Y570 386 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 TM7SF2O76062 418 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 BAG2O95816 211 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 KITP10721 976 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 POLR2BP30876 1174 aaKnown RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 STIP1P31948 543 aaKnown RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 SP2Q02086 613 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 THTPAQ9BU02 230 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 SLC13A1Q9BZW2 595 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 C20orf27Q9GZN8 174 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 PLAC1Q9HBJ0 212 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 MARCOQ9UEW3 520 aaPredicted RBP13.98□□□□□ -0.17
SKA3-202ENST00000314759 SLC7A8Q9UHI5 535 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 ANGPTL2Q9UKU9 493 aa13.98□□□□□ -0.17
SKA3-202ENST00000314759 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 CCDC195A0A1B0GUA6 201 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 SPAG6O75602 509 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 SNRPAP09012 282 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 ASPAP45381 313 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 AP3M2P53677 418 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 AQP5P55064 265 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 ACTR3P61158 418 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 ROR1Q01973 937 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 MTMR2Q13614 643 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 CHI3L2Q15782 390 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 GSTA3Q16772 222 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 MYLK4Q86YV6 388 aaPredicted RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 NR1H4Q96RI1 486 aaPredicted RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 ECSITQ9BQ95 431 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 SIRPGQ9P1W8 387 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 PPM1HQ9ULR3 514 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 RFPL1O75677 317 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 CD19P15391 556 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 YWHAZP63104 245 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 TRMT5Q32P41 509 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 TEX44Q53QW1 395 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 XYLT1Q86Y38 959 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 SLC7A3Q8WY07 619 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 CCDC106Q9BWC9 280 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 UGT1A9O60656 530 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 KRT37O76014 449 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 TRUB2O95900 331 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 OATP04181 439 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 ERBB2P04626 1255 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 DSG1Q02413 1049 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 CAPSQ13938 189 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 DUOXA2Q1HG44 320 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 LIN52Q52LA3 116 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 ANGEL2Q5VTE6 544 aaKnown RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 SESTD1Q86VW0 696 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 TCHPQ9BT92 498 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 WWP1Q9H0M0 922 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 LHX5Q9H2C1 402 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 TMEM134Q9H6X4 195 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 UGT1A7Q9HAW7 530 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 UGT1A10Q9HAW8 530 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 UGT1A8Q9HAW9 530 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 SMYD2Q9NRG4 433 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 RAB6BQ9NRW1 208 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 USP18Q9UMW8 372 aa13.97□□□□□ -0.17
SKA3-202ENST00000314759 MAFBQ9Y5Q3 323 aaPredicted RBP13.97□□□□□ -0.17
SKA3-202ENST00000314759 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 CHADO15335 359 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 CCNFP41002 786 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 ALDH18A1P54886 795 aaKnown RBP13.96□□□□□ -0.17
SKA3-202ENST00000314759 CDC16Q13042 620 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 TRPC3Q13507 836 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 BMPR2Q13873 1038 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 LRRC36Q1X8D7 754 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 ATG16L1Q676U5 607 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 NCSTNQ92542 709 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 PEBP4Q96S96 227 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 RSAD1Q9HA92 442 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 USP29Q9HBJ7 922 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 ZNF180Q9UJW8 692 aa13.96□□□□□ -0.17
SKA3-202ENST00000314759 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 ARHGAP8P85298 464 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 ORC1Q13415 861 aa13.96□□□□□ -0.18
SKA3-202ENST00000314759 ZNF699Q32M78 642 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms