RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 STK4Q13043 487 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TOB2Q14106 344 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 PARP6Q2NL67 630 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 PAGE2BQ5JRK9 111 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 NLRP14Q86W24 1093 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 GLYCTKQ8IVS8 523 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 OTULINQ96BN8 352 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 MTMR4Q9NYA4 1195 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CHST10O43529 356 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CLPTM1O96005 669 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 APRTP07741 180 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 STAG3L1P0CL83 205 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 S100GP29377 79 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 KRT74Q7RTS7 529 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 HAUS6Q7Z4H7 955 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 P3H2Q8IVL5 708 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 KLHL7Q8IXQ5 586 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 DEPDC4Q8N2C3 294 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SNX31Q8N9S9 440 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CASKIN2Q8WXE0 1202 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 AGPAT1Q99943 283 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZNF670Q9BS34 389 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CAAP1Q9H8G2 361 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 MANSC1Q9H8J5 431 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 NCOA5Q9HCD5 579 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZNF302Q9NR11 478 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CNOT8Q9UFF9 292 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 FRMPD2Q68DX3 1309 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 KIF28PB7ZC32 967 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L15C9J2P7 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L13C9JLJ4 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L11C9JVI0 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L18D6R9N7 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L22D6RA61 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L17D6RBQ6 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L19D6RCP7 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L20D6RJB6 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 APOC4-APOC2K7ER74 178 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CAND2O75155 1236 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 LRRN2O75325 713 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 PALMO75781 387 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 APOC2P02655 101 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 FGRP09769 529 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TGFB2P61812 414 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ACTN3Q08043 901 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP17L24Q0WX57 530 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 KIF19Q2TAC6 998 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ZFPM1Q8IX07 1006 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ROPN1LQ96C74 230 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 EHD1Q9H4M9 534 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ARL15Q9NXU5 204 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 EIF3LQ9Y262 564 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 UMODL1Q5DID0 1318 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CYP3A7-CYP3A51PA0A087WV96 503 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CCDC154A6NI56 674 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 RBAK-RBAKDNI3L0D1 243 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 LCA5LO95447 670 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 CYP3A7P24462 503 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 PLA2G4AP47712 749 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SARSP49591 514 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 DRAP1Q14919 205 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 SHQ1Q6PI26 577 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 DSG4Q86SJ6 1040 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TCAIMQ8N3R3 496 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 B3GALT6Q96L58 329 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 LXNQ9BS40 222 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TRIM39Q9HCM9 518 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 LNPEPQ9UIQ6 1025 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 NINQ8N4C6 2090 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 ICAM1P05362 532 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 SCNN1AP37088 669 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TMEM270Q6UE05 265 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 DCP1BQ8IZD4 617 aaKnown RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 TSPEARQ8WU66 669 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 RIN2Q8WYP3 895 aaPredicted RBP4.15□□□□□ -1.75
USH2A-201ENST00000307340 ULK4Q96C45 1275 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 USP21Q9UK80 565 aa4.15□□□□□ -1.75
USH2A-201ENST00000307340 TRIM66O15016 1216 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PEX1O43933 1283 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FRG1Q14331 258 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZBTB41Q5SVQ8 909 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TDRPQ86YL5 185 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SRFBP1Q8NEF9 429 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ENGASEQ8NFI3 743 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 RGS18Q9NS28 235 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 IRAK3Q9Y616 596 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SLC9A3R1O14745 358 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 PROSER1Q86XN7 944 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 UCMAQ8WVF2 138 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SCYL1Q96KG9 808 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 EIF2AK1Q9BQI3 630 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 MRPL46Q9H2W6 279 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 MOV10Q9HCE1 1003 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ARPC4-TTLL3A0A0A6YYG9 625 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 F5H6K3 240 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 JAK2O60674 1132 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MAGEC1O60732 1142 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GH1P01241 217 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF18P17022 549 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 NPY2RP49146 381 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms