RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 EDAQ92838 391 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 USP13Q92995 863 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RPP25Q9BUL9 199 aaKnown RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SYNCQ9H7C4 482 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ARHGAP26Q9UNA1 814 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CPQQ9Y646 472 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 USP3Q9Y6I4 520 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PIK3R2O00459 728 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 COCHO43405 550 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CFHP08603 1231 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZDHHC11BP0C7U3 371 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RARGP13631 454 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FERP16591 822 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GDI1P31150 447 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ATP5C1P36542 298 aaKnown RBP11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GPD2P43304 727 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 YWHAGP61981 247 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC7A9P82251 487 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ARID5AQ03989 594 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 USP4Q13107 963 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PDCLQ13371 301 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MTF1Q14872 753 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 C10orf120Q5SQS8 335 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TAF3Q5VWG9 929 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 POTEHQ6S545 545 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 C1orf131Q8NDD1 294 aaKnown RBP11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CSGALNACT1Q8TDX6 532 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SH3RF2Q8TEC5 729 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RNF139Q8WU17 664 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DNASE1L2Q92874 299 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IRF7Q92985 503 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IQCDQ96DY2 449 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PLA2G2FQ9BZM2 168 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MIS12Q9H081 205 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SMOC2Q9H3U7 446 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CCSER2Q9H7U1 834 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CYLDQ9NQC7 956 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC2A4RGQ9NR83 387 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 OLA1Q9NTK5 396 aaKnown RBP11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CLIC5Q9NZA1 410 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MYO6Q9UM54 1294 aa11.55□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CHADO15335 359 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LSM8O95777 96 aaKnown RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 OLFM2O95897 454 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TCF3P15923 654 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IFNAR2P48551 515 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DAOAP59103 153 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF77Q15935 545 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PM20D1Q6GTS8 502 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SCML4Q8N228 414 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF397Q8NF99 534 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 STK32AQ8WU08 396 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IRGQQ8WZA9 623 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC22A12Q96S37 553 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 XPO4Q9C0E2 1151 aaKnown RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LHX5Q9H2C1 402 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MFSD1Q9H3U5 465 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NMUR1Q9HB89 426 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ABCC13Q9NSE7 274 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SEPT11Q9NVA2 429 aaKnown RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DNMT3LQ9UJW3 386 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LSM7Q9UK45 103 aaKnown RBP11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CCL26Q9Y258 94 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 E5RJQ4 531 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LEFTY2O00292 366 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LTFP02788 710 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MMEP08473 750 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TPM1P09493 284 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IRF1P10914 325 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GPC5P78333 572 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CDR2Q01850 454 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ASIC2Q16515 512 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SFMBT2Q5VUG0 894 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 KLHDC10Q6PID8 442 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TRIM72Q6ZMU5 477 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TRIM67Q6ZTA4 783 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TOGARAM2Q6ZUX3 1019 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms