RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 ARID5AQ03989 594 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 NNTQ13423 1086 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 SLC18A3Q16572 532 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 CCDC142Q17RM4 750 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 CLEC16AQ2KHT3 1053 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 HECTD3Q5T447 861 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 SLC26A9Q7LBE3 791 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 TMEM150AQ86TG1 271 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 ADHFE1Q8IWW8 467 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 TC2NQ8N9U0 490 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 SCAMP5Q8TAC9 235 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 UBE2Q2Q8WVN8 375 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 FGF13Q92913 245 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
VPREB1-201ENST00000302273 IRX2Q9BZI1 471 aaPredicted RBP9.29□□□□□ -0.92
VPREB1-201ENST00000302273 POPDC2Q9HBU9 364 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 PRDM6Q9NQX0 595 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 ST7Q9NRC1 585 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 IGSF9Q9P2J2 1179 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 ADAMTS1Q9UHI8 967 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 INTUQ9ULD6 942 aa9.29□□□□□ -0.92
VPREB1-201ENST00000302273 MAGED2Q9UNF1 606 aaPredicted RBP9.29□□□□□ -0.92
VPREB1-201ENST00000302273 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ANHXE9PGG2 379 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 SOAT2O75908 522 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 F9P00740 461 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 OAS1P00973 400 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 PNMA6AP0CW24 399 aaPredicted RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 BMP1P13497 986 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 DESP17661 470 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 HDCP19113 662 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 GPR15P49685 360 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ADKP55263 362 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 DAOAP59103 153 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 YWHAGP61981 247 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 USP46P62068 366 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 COG7P83436 770 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 SLC6A3Q01959 620 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ADIGQ0VDE8 80 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ASTE1Q2TB18 679 aaPredicted RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 TDRD12Q587J7 1177 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 BTBD8Q5XKL5 378 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 WDR59Q6PJI9 974 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ZNF571Q7Z3V5 609 aaPredicted RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 TXLNBQ8N3L3 684 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 CELF5Q8N6W0 485 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 TDRD5Q8NAT2 981 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 CCDC112Q8NEF3 446 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 SMARCD2Q92925 531 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 MCRS1Q96EZ8 462 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ZNF830Q96NB3 372 aaPredicted RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 NCAPGQ9BPX3 1015 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 DEF6Q9H4E7 631 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 POMKQ9H5K3 350 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPREB1-201ENST00000302273 HCFC1R1Q9NWW0 138 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ARHGAP20Q9P2F6 1191 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 DNMT3LQ9UJW3 386 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 NAGPAQ9UK23 515 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ARHGAP26Q9UNA1 814 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 PAXBP1Q9Y5B6 917 aa9.28□□□□□ -0.92
VPREB1-201ENST00000302273 ANKRD62A6NC57 917 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 C19orf67A6NJJ6 358 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 LOC730098B7Z3J9 87 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 E5RJQ4 531 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 PAPSS1O43252 624 aaPredicted RBP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 AKR1B10O60218 316 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 MOSPD3O75425 235 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 ECI2O75521 394 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 IPO7O95373 1038 aaKnown RBP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 LCA5LO95447 670 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 LTFP02788 710 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 ERBB2P04626 1255 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 SLC2A3P11169 496 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 CYLC1P35663 651 aaPredicted RBP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 CCR2P41597 374 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 MLLT6P55198 1093 aaPredicted RBP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 RING1Q06587 406 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 MTMR3Q13615 1198 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 ACAP1Q15027 740 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 SLC5A9Q2M3M2 681 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 PTPN20Q4JDL3 420 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 SDHAF4Q5VUM1 108 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 TAF3Q5VWG9 929 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 NAA35Q5VZE5 725 aa9.27□□□□□ -0.93
VPREB1-201ENST00000302273 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
VPREB1-201ENST00000302273 MSANTD2Q6P1R3 559 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms