RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 USP33Q8TEY7 942 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 ADNPQ9H2P0 1102 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 USP18Q9UMW8 372 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 A0A0B4J269 797 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 MAP4P27816 1152 aaKnown RBP12.57□□□□□ -0.4
PDGFD-201ENST00000302251 SLC1A6P48664 564 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 NEK3P51956 506 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 PDK3Q15120 406 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 Q3C1V9 767 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 HYIQ5T013 277 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CIAPIN1Q6FI81 312 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CDKL3Q8IVW4 592 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-201ENST00000302251 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 MRPL4Q9BYD3 311 aaKnown RBP12.57□□□□□ -0.4
PDGFD-201ENST00000302251 NIF3L1Q9GZT8 377 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
PDGFD-201ENST00000302251 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 LAMB1P07942 1786 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CAPN8A6NHC0 703 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 GOLGA8TH3BQL2 631 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 PSMD10O75832 226 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CSPG5O95196 566 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 APBA3O96018 575 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 NPR1P16066 1061 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 PSMC3P17980 439 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CYP2R1Q6VVX0 501 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 UNC45BQ8IWX7 931 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 CERS5Q8N5B7 392 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 FAM192AQ9GZU8 254 aa12.57□□□□□ -0.4
PDGFD-201ENST00000302251 BAZ2AQ9UIF9 1905 aaKnown RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SPAG6O75602 509 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 CHRNA5P30532 468 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SCNN1BP51168 640 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 DPYSL3Q14195 570 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 ANKRD22Q5VYY1 191 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 KATNAL2Q8IYT4 538 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 GALNT15Q8N3T1 639 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 PAIP1Q9H074 479 aaKnown RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 DMAP1Q9NPF5 467 aaPredicted RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 NUB1Q9Y5A7 615 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SNX9Q9Y5X1 595 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 ALOX15BO15296 676 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 FESP07332 822 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 TMED10P49755 219 aaKnown RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SNX25Q9H3E2 840 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 STX18Q9P2W9 335 aaKnown RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 TCRBV9S1A1TA0A576 114 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SERPINB9P50453 376 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 LIN52Q52LA3 116 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 XKR3Q5GH77 459 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 TRAPPC9Q96Q05 1148 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 FAM49AQ9H0Q0 323 aaPredicted RBP12.56□□□□□ -0.4
PDGFD-201ENST00000302251 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 CDY2AQ9Y6F7 541 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 CDY1Q9Y6F8 540 aa12.56□□□□□ -0.4
PDGFD-201ENST00000302251 WFS1O76024 890 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 RBL1P28749 1068 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 NCKAP1LP55160 1127 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 PDE4DIPQ5VU43 2346 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 TTC33Q6PID6 262 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 LPCAT2Q7L5N7 544 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 EGFL6Q8IUX8 553 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 STKLD1Q8NE28 680 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 MARK4Q96L34 752 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 CATSPER2Q96P56 530 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 AVENQ9NQS1 362 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 MID2Q9UJV3 735 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 MROH7Q68CQ1 1323 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 CPA3P15088 417 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 VAV1P15498 845 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 GALK1P51570 392 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 RTP1P59025 263 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 GCNT1Q02742 428 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 ATP1A4Q13733 1029 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 AMHR2Q16671 573 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 EMC10Q5UCC4 262 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
PDGFD-201ENST00000302251 SNX32Q86XE0 403 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 HPS6Q86YV9 775 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
PDGFD-201ENST00000302251 THAP1Q9NVV9 213 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms