RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MRPS35P82673 323 aaKnown RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 RBP5P82980 135 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 MXD4Q14582 209 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 SKA2Q8WVK7 121 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 C2orf40Q9H1Z8 148 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 ERVK-10P10266 1014 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 PLK1P53350 603 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 PKNOX1P55347 436 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
CASC4-201ENST00000299957 BNIP1Q12981 228 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 C15orf52Q6ZUT6 534 aaKnown RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 SPATA6LQ8N4H0 392 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 TFAP2BQ92481 460 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 NDRG1Q92597 394 aaKnown RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 ZNF516Q92618 1163 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 MMP19Q99542 508 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 AVENQ9NQS1 362 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 EPS15L1Q9UBC2 864 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 NKX1-2Q9UD57 310 aaPredicted RBP13.79□□□□□ -0.2
CASC4-201ENST00000299957 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
CASC4-201ENST00000299957 KNL1Q8NG31 2342 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 TCRBV9S1A1TA0A576 114 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 M0QYT0 321 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 EGFRP00533 1210 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 TTLL4Q14679 1199 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 RNF220Q5VTB9 566 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 KCNT2Q6UVM3 1135 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 CPXM1Q96SM3 734 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 C17orf75Q9HAS0 396 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 ANKRD12Q6UB98 2062 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 TCRBV7S3A2A0A539 114 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 MICAL2O94851 1124 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 COPAP53621 1224 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 CAPSQ13938 189 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 PDK4Q16654 411 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 EFHC2Q5JST6 749 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 LRRC8EQ6NSJ5 796 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 PIGWQ7Z7B1 504 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 NUP93Q8N1F7 819 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 ATP6V1E2Q96A05 226 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 SLC17A6Q9P2U8 582 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 SLC24A2Q9UI40 661 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 GRID1Q9ULK0 1009 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 LACTBL1A8MY62 500 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 M0QZ92 97 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 TOP3BO95985 862 aaKnown RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 FDX1P10109 184 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
CASC4-201ENST00000299957 MGAT1P26572 445 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 ANO4Q32M45 955 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 HSP90AA5PQ58FG0 334 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 C6orf89Q6UWU4 347 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 ACAD11Q709F0 780 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 TMEM176AQ96HP8 235 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
CASC4-201ENST00000299957 PGM3O95394 542 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 HMBSP08397 361 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 NELFEP18615 380 aaKnown RBP13.77□□□□□ -0.2
CASC4-201ENST00000299957 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.2
CASC4-201ENST00000299957 TPI1P60174 286 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 STX1BP61266 288 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 IER5Q5VY09 327 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 HASPINQ8TF76 798 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 EDEM1Q92611 657 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 DPP3Q9NY33 737 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 TAF1P21675 1872 aa13.77□□□□□ -0.2
CASC4-201ENST00000299957 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
CASC4-201ENST00000299957 CYP2F1P24903 491 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 MCL1Q07820 350 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 CLNKQ7Z7G1 428 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 EME1Q96AY2 570 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.21
CASC4-201ENST00000299957 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 DDX18Q9NVP1 670 aaKnown RBP13.77□□□□□ -0.21
CASC4-201ENST00000299957 RHBDL2Q9NX52 303 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 MGRN1O60291 552 aa13.77□□□□□ -0.21
CASC4-201ENST00000299957 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms