RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 GPN3Q9UHW5 284 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 VANGL2Q9ULK5 521 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 KRT87PA6NCN2 255 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 GUCY2CP25092 1073 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 DHPSP49366 369 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 CDH8P55286 799 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 FSTL1Q12841 308 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CCDC38Q502W7 563 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TMC5Q6UXY8 1006 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CCDC60Q8IWA6 550 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 FAM71DQ8N9W8 422 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 FEZF2Q8TBJ5 459 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 FICDQ9BVA6 458 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 Q9H521 79 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TRMT13Q9NUP7 481 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 CCDC188H7C350 402 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 MTSS1O43312 755 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 TBL1XO60907 577 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 SERPINI2O75830 405 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 HSPA1AP0DMV8 641 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 HSPA1BP0DMV9 641 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 NCAPHQ15003 741 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 Q4G0T1 1027 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 TRIM68Q6AZZ1 485 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 FAM47EQ6ZV65 393 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 NUDCD3Q8IVD9 361 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 TMEM159Q96B96 161 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 SGF29Q96ES7 293 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 ZBTB45Q96K62 511 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 UROC1Q96N76 676 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 CAPS2Q9BXY5 557 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 ZCCHC2Q9C0B9 1178 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 KCTD10Q9H3F6 313 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 ADA2Q9NZK5 511 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 NCDNQ9UBB6 729 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 TSPAN16Q9UKR8 245 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 PTCH2Q9Y6C5 1203 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 PTPN3P26045 913 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 AARSP49588 968 aaKnown RBP eCLIP7.37□□□□□ -1.23
RAG1-201ENST00000299440 PTPN11Q06124 597 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 PDE1CQ14123 709 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 RAET1GQ6H3X3 334 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 USP49Q70CQ1 688 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 MYO1HQ8N1T3 1032 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 WDR18Q9BV38 432 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 RSPH9Q9H1X1 276 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 GTF3C4Q9UKN8 822 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 KIAA1257Q9ULG3 409 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 DNAJC16Q9Y2G8 782 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 A0A087WUV0 522 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 TARSL2A2RTX5 802 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 CTIFO43310 598 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 STAU1O95793 577 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 JCHAINP01591 159 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 GALCP54803 685 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 MRNIPQ6NTE8 343 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 EMC1Q8N766 993 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 MCOLN3Q8TDD5 553 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 PIK3R5Q8WYR1 880 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 TTPALQ9BTX7 342 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 SLC26A4O43511 780 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 RBP3P10745 1247 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 GTF2E2P29084 291 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 CRYBB1P53674 252 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 TGM3Q08188 693 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 DDR2Q16832 855 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 SERPINI1Q99574 410 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 UVRAGQ9P2Y5 699 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 FAM86B1E9PN63 330 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 FAM86B2P0C5J1 330 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 HLA-DPA1P20036 260 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 SMAD3P84022 425 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 FMR1NBQ8N0W7 255 aaPredicted RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 MTBPQ96DY7 904 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 RANBP17Q9H2T7 1088 aaKnown RBP7.37□□□□□ -1.23
RAG1-201ENST00000299440 SMYD3Q9H7B4 428 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 DNMT3LQ9UJW3 386 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 CHMP2BQ9UQN3 213 aa7.37□□□□□ -1.23
RAG1-201ENST00000299440 CLASP2O75122 1294 aaKnown RBP7.36□□□□□ -1.23
RAG1-201ENST00000299440 CRTAMO95727 393 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 MMP3P08254 477 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 ESRRAP11474 423 aaPredicted RBP7.36□□□□□ -1.23
RAG1-201ENST00000299440 ALDH9A1P49189 494 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 RENBPP51606 427 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 CYP24A1Q07973 514 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 TRIM65Q6PJ69 517 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 SETD3Q86TU7 594 aaPredicted RBP7.36□□□□□ -1.23
RAG1-201ENST00000299440 TTC7BQ86TV6 843 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 CLYBLQ8N0X4 340 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 NUP93Q8N1F7 819 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 OR10G6Q8NH81 332 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 APBB2Q92870 758 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 LRRC37BQ96QE4 947 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 ARHGAP9Q9BRR9 750 aa7.36□□□□□ -1.23
RAG1-201ENST00000299440 TM6SF2Q9BZW4 377 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms