RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GOLGA6L9A6NEM1 432 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 LACTBL1A8MY62 500 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 ZSCAN12O43309 604 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 IPO7O95373 1038 aaKnown RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 GABRR2P28476 465 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 PRKCIP41743 596 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 WNT7BP56706 349 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 TNK2Q07912 1038 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 MAPK8IP2Q13387 824 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 TRPC3Q13507 836 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 NCOA4Q13772 614 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 RAPGEF1Q13905 1077 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 TMEM132DQ14C87 1099 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 SGSM1Q2NKQ1 1148 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 PSAPL1Q6NUJ1 521 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 WDR59Q6PJI9 974 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 GAREM2Q75VX8 874 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 DNAJB7Q7Z6W7 309 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 C17orf53Q8N3J3 647 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 SMOC1Q9H4F8 434 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 FAM124BQ9H5Z6 455 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 ITGA11Q9UKX5 1188 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 R3HCC1Q9Y3T6 440 aaKnown RBP22.28■■□□□ 1.16
SMCO4-201ENST00000298966 PTPRJQ12913 1337 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 IGF2RP11717 2491 aa22.28■■□□□ 1.16
SMCO4-201ENST00000298966 ZFYVE26Q68DK2 2539 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 EML5Q05BV3 1969 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 GFPT2O94808 682 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 ATICP31939 592 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 SOX5P35711 763 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 TFAMQ00059 246 aaKnown RBP22.27■■□□□ 1.16
SMCO4-201ENST00000298966 PKN3Q6P5Z2 889 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 UNQ6494/PRO21346Q6UXR6 183 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 ITIH5Q86UX2 942 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 EFCAB13Q8IY85 973 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 OR5B17Q8NGF7 314 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 SEMA4DQ92854 862 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 PSMG2Q969U7 264 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 ZC3H10Q96K80 434 aaKnown RBP22.27■■□□□ 1.16
SMCO4-201ENST00000298966 TASP1Q9H6P5 420 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 UBE2TQ9NPD8 197 aaPredicted RBP22.27■■□□□ 1.16
SMCO4-201ENST00000298966 SLC27A5Q9Y2P5 690 aa22.27■■□□□ 1.16
SMCO4-201ENST00000298966 SOWAHDA6NJG2 315 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 F8VZ95 297 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 MEFVO15553 781 aaPredicted RBP22.26■■□□□ 1.15
SMCO4-201ENST00000298966 STAU1O95793 577 aaKnown RBP22.26■■□□□ 1.15
SMCO4-201ENST00000298966 WEE1P30291 646 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 GRSF1Q12849 480 aaKnown RBP eCLIP22.26■■□□□ 1.151e-10■■□□□ 14.5
SMCO4-201ENST00000298966 COL9A2Q14055 689 aaPredicted RBP22.26■■□□□ 1.15
SMCO4-201ENST00000298966 DRAP1Q14919 205 aaPredicted RBP22.26■■□□□ 1.15
SMCO4-201ENST00000298966 RAD9BQ6WBX8 426 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 DSTYKQ6XUX3 929 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 VPS36Q86VN1 386 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 PPM1KQ8N3J5 372 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 TXLNBQ8N3L3 684 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 GCNAQ96QF7 691 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 MTMR12Q9C0I1 747 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 VRTNQ9H8Y1 702 aa22.26■■□□□ 1.15
SMCO4-201ENST00000298966 MTMR11A4FU01 709 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 C1QTNF9BB2RNN3 333 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 TULP1O00294 542 aaPredicted RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 VNN1O95497 513 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 PRAMEF12O95522 483 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 ASS1P00966 412 aaKnown RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 CCDC175P0C221 793 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 C1QTNF9P0C862 333 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 LRPAP1P30533 357 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 NOVA1P51513 510 aaKnown RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 KRT83P78385 493 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 LMBRD2Q68DH5 695 aaPredicted RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 JADE1Q6IE81 842 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 CAMKK1Q8N5S9 505 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 ATAD1Q8NBU5 361 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 CCDC42Q96M95 316 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 LUC7LQ9NQ29 371 aaKnown RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 ZMIZ1Q9ULJ6 1067 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 UBQLN1Q9UMX0 589 aaKnown RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 PPP2R2CQ9Y2T4 447 aa22.25■■□□□ 1.15
SMCO4-201ENST00000298966 EPN1Q9Y6I3 576 aaPredicted RBP22.25■■□□□ 1.15
SMCO4-201ENST00000298966 EIF3CLB5ME19 914 aaKnown RBP22.24■■□□□ 1.15
SMCO4-201ENST00000298966 CYP3A5P20815 502 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 YWHAEP62258 255 aaKnown RBP22.24■■□□□ 1.15
SMCO4-201ENST00000298966 NOP14P78316 857 aaKnown RBP22.24■■□□□ 1.15
SMCO4-201ENST00000298966 KLHL30Q0D2K2 578 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 ELF2Q15723 593 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 PLK5Q496M5 336 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 TMEM196Q5HYL7 178 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 OVOS1Q6IE37 1185 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 SHC3Q92529 594 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 PPP1R13BQ96KQ4 1090 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 EIF3CQ99613 913 aaKnown RBP22.24■■□□□ 1.15
SMCO4-201ENST00000298966 EDEM2Q9BV94 578 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 DEF6Q9H4E7 631 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 NHEJ1Q9H9Q4 299 aaPredicted RBP22.24■■□□□ 1.15
SMCO4-201ENST00000298966 GKN1Q9NS71 199 aa22.24■■□□□ 1.15
SMCO4-201ENST00000298966 ZNF638Q14966 1978 aaKnown RBP22.23■■□□□ 1.15
SMCO4-201ENST00000298966 NDUFA10O95299 355 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 NFICP08651 508 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 P4HA1P13674 534 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 CDC25CP30307 473 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms