RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 DCUN1D5Q9BTE7 237 aa14□□□□□ -0.17
SKA3-201ENST00000298260 AMNQ9BXJ7 453 aa14□□□□□ -0.17
SKA3-201ENST00000298260 ZNRF3Q9ULT6 936 aa14□□□□□ -0.17
SKA3-201ENST00000298260 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
SKA3-201ENST00000298260 IQANK1A0A1B0GTG1 560 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SDR42E2A6NKP2 422 aa14□□□□□ -0.17
SKA3-201ENST00000298260 GPSM2P81274 684 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SLC18A2Q05940 514 aa14□□□□□ -0.17
SKA3-201ENST00000298260 CD300CQ08708 224 aa14□□□□□ -0.17
SKA3-201ENST00000298260 NFIAQ12857 509 aa14□□□□□ -0.17
SKA3-201ENST00000298260 AP3B2Q13367 1082 aa14□□□□□ -0.17
SKA3-201ENST00000298260 ITPRIPL1Q6GPH6 555 aa14□□□□□ -0.17
SKA3-201ENST00000298260 AAGABQ6PD74 315 aa14□□□□□ -0.17
SKA3-201ENST00000298260 PPIL6Q8IXY8 311 aa14□□□□□ -0.17
SKA3-201ENST00000298260 ALKBH8Q96BT7 664 aaKnown RBP14□□□□□ -0.17
SKA3-201ENST00000298260 NACC1Q96RE7 527 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SLX1AQ9BQ83 275 aa14□□□□□ -0.17
SKA3-201ENST00000298260 EPB41L1Q9H4G0 881 aa14□□□□□ -0.17
SKA3-201ENST00000298260 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SLC17A6Q9P2U8 582 aa14□□□□□ -0.17
SKA3-201ENST00000298260 DNAJC16Q9Y2G8 782 aa14□□□□□ -0.17
SKA3-201ENST00000298260 CEPT1Q9Y6K0 416 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SF3B1O75533 1304 aaKnown RBP eCLIP14□□□□□ -0.17
SKA3-201ENST00000298260 UFL1O94874 794 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SERPINB2P05120 415 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SERPINA6P08185 405 aa14□□□□□ -0.17
SKA3-201ENST00000298260 ITGAXP20702 1163 aa14□□□□□ -0.17
SKA3-201ENST00000298260 KCNA4P22459 653 aa14□□□□□ -0.17
SKA3-201ENST00000298260 MLH1P40692 756 aa14□□□□□ -0.17
SKA3-201ENST00000298260 COPAP53621 1224 aa14□□□□□ -0.17
SKA3-201ENST00000298260 RPL10AP62906 217 aaKnown RBP14□□□□□ -0.17
SKA3-201ENST00000298260 KRT81Q14533 505 aa14□□□□□ -0.17
SKA3-201ENST00000298260 PTAR1Q7Z6K3 402 aaPredicted RBP14□□□□□ -0.17
SKA3-201ENST00000298260 PDIK1LQ8N165 341 aa14□□□□□ -0.17
SKA3-201ENST00000298260 TFB1MQ8WVM0 346 aaKnown RBP14□□□□□ -0.17
SKA3-201ENST00000298260 OXCT2Q9BYC2 517 aaPredicted RBP14□□□□□ -0.17
SKA3-201ENST00000298260 PNPOQ9NVS9 261 aa14□□□□□ -0.17
SKA3-201ENST00000298260 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
SKA3-201ENST00000298260 DMTF1Q9Y222 760 aa14□□□□□ -0.17
SKA3-201ENST00000298260 PLLPQ9Y342 182 aa14□□□□□ -0.17
SKA3-201ENST00000298260 hCG_1818297A0A087WSY0 165 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 NDC80O14777 642 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 SIN3BO75182 1162 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 GDF11O95390 407 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 PRELPP51888 382 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 WNT7BP56706 349 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 NRF1Q16656 503 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 FAM91A1Q658Y4 838 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 TMEM270Q6UE05 265 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 MAVSQ7Z434 540 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 ADGRG6Q86SQ4 1221 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 SLC44A1Q8WWI5 657 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 MOCOSQ96EN8 888 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 ACCSQ96QU6 501 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 MAF1Q9H063 256 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 ANLNQ9NQW6 1124 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 SMYD2Q9NRG4 433 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 GNEQ9Y223 722 aaKnown RBP13.99□□□□□ -0.17
SKA3-201ENST00000298260 PCDHAC2Q9Y5I4 1007 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 A0A0B4J269 797 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
SKA3-201ENST00000298260 CST8O60676 142 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 CDH15P55291 814 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 TUBB3Q13509 450 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 PPP1R14CQ8TAE6 165 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 RAB3IL1Q8TBN0 382 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 GIPC3Q8TF64 312 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 HSPH1Q92598 858 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 XAB2Q9HCS7 855 aaKnown RBP13.99□□□□□ -0.17
SKA3-201ENST00000298260 TUFT1Q9NNX1 390 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 AVENQ9NQS1 362 aaPredicted RBP13.99□□□□□ -0.17
SKA3-201ENST00000298260 NDUFA13Q9P0J0 144 aa13.99□□□□□ -0.17
SKA3-201ENST00000298260 P4HA2O15460 535 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 DCXO43602 365 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 DGKIO75912 1065 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 VIL1P09327 827 aaKnown RBP13.98□□□□□ -0.17
SKA3-201ENST00000298260 ALOX15P16050 662 aaPredicted RBP13.98□□□□□ -0.17
SKA3-201ENST00000298260 GTF2IP78347 998 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 PSMD6Q15008 389 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 ZNF394Q53GI3 561 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 CYP4A22Q5TCH4 519 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 DNAJC14Q6Y2X3 702 aaPredicted RBP13.98□□□□□ -0.17
SKA3-201ENST00000298260 LILRA2Q8N149 483 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 NDUFAF2Q8N183 169 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 MARVELD2Q8N4S9 558 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 SMYD1Q8NB12 490 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 RSAD2Q8WXG1 361 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 FAM81BQ96LP2 452 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 C7orf26Q96N11 449 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 POLIQ9UNA4 740 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 AGTPBP1Q9UPW5 1226 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 CROCCQ5TZA2 2017 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 STRNO43815 780 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 F7P08709 466 aaPredicted RBP13.98□□□□□ -0.17
SKA3-201ENST00000298260 THRAP10827 490 aa13.98□□□□□ -0.17
SKA3-201ENST00000298260 STX3Q13277 289 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms