RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SPATA2LQ8IUW3 424 aaPredicted RBP23.89■■□□□ 1.42
PTX3-201ENST00000295927 SEC14L1Q92503 715 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 RAB17Q9H0T7 212 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 CNGB3Q9NQW8 809 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 HOMER3Q9NSC5 361 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 TRIM43BA6NCK2 446 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 ATP8B1O43520 1251 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 SASH3O75995 380 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 TIMP1P01033 207 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 PBX3P40426 434 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 CCNG2Q16589 344 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 SLC39A12Q504Y0 691 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 DDX42Q86XP3 938 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTX3-201ENST00000295927 TRIM43Q96BQ3 446 aaPredicted RBP23.88■■□□□ 1.41
PTX3-201ENST00000295927 ERP44Q9BS26 406 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 PRDM5Q9NQX1 630 aaPredicted RBP23.88■■□□□ 1.41
PTX3-201ENST00000295927 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTX3-201ENST00000295927 SF3B1O75533 1304 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTX3-201ENST00000295927 DAPK3O43293 454 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 USP17L7P0C7H9 530 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
PTX3-201ENST00000295927 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
PTX3-201ENST00000295927 EPHB4P54760 987 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 CUL1Q13616 776 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 BOLA3Q53S33 107 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 FUT10Q6P4F1 479 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 HFE2Q6ZVN8 426 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 DCP1BQ8IZD4 617 aaKnown RBP23.88■■□□□ 1.41
PTX3-201ENST00000295927 TBCBQ99426 244 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 FAM118BQ9BPY3 351 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 TMEM106CQ9BVX2 250 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 RASAL2Q9UJF2 1139 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 EFR3BQ9Y2G0 817 aa23.88■■□□□ 1.41
PTX3-201ENST00000295927 FGFR3P22607 806 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 MRPL58Q14197 206 aaKnown RBP23.87■■□□□ 1.41
PTX3-201ENST00000295927 SLC25A52Q3SY17 297 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 DCAF6Q58WW2 860 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 HDXQ7Z353 690 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 B3GALT6Q96L58 329 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 GDAP1L1Q96MZ0 367 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 SLC2A13Q96QE2 648 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 TRIM31Q9BZY9 425 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 DPH5Q9H2P9 285 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 POPDC2Q9HBU9 364 aa23.87■■□□□ 1.41
PTX3-201ENST00000295927 YJEFN3A6XGL0 299 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 E7ENQ6 273 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 DGKIO75912 1065 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ENDOD1O94919 500 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ZBED1O96006 694 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 CYP2F1P24903 491 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 NOS2P35228 1153 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ARSEP51690 589 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ATXN1P54253 815 aaKnown RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 CDH6P55285 790 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 CTXN3Q4LDR2 81 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 DUPD1Q68J44 220 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 STRADAQ7RTN6 431 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 TMEM173Q86WV6 379 aaPredicted RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 EIF1ADQ8N9N8 165 aaKnown RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 TEKT4Q8WW24 435 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 SLCO2A1Q92959 643 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 PNPLA8Q9NP80 782 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 KIAA0355O15063 1070 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ECEL1O95672 775 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 CSF2RAP15509 400 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 TNNT3P45378 269 aaPredicted RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 SULT1E1P49888 294 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 BCL7CQ8WUZ0 217 aaPredicted RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 SNRNP25Q9BV90 132 aaKnown RBP23.86■■□□□ 1.41
PTX3-201ENST00000295927 CALN1Q9BXU9 219 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 CALCOCO1Q9P1Z2 691 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 COL4A6Q14031 1691 aa23.86■■□□□ 1.41
PTX3-201ENST00000295927 ABHD14A-ACY1A0A1B0GW23 586 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 FYNP06241 537 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 HLTFQ14527 1009 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTX3-201ENST00000295927 CASP8Q14790 479 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 SYPL2Q5VXT5 272 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 EMBQ6PCB8 327 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 BHLHA9Q7RTU4 235 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 NT5C3BQ969T7 300 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 FAM114A2Q9NRY5 505 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 GPATCH2LQ9NWQ4 482 aa23.85■■□□□ 1.41
PTX3-201ENST00000295927 MAP2K7O14733 419 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 RAG1P15918 1043 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 ECHS1P30084 290 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 GRIK1P39086 918 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 PITX1P78337 314 aaPredicted RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 ELAVL2Q12926 359 aaKnown RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 ZC3H12AQ5D1E8 599 aaKnown RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 OTUD1Q5VV17 481 aaPredicted RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 PM20D1Q6GTS8 502 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 ZNF280DQ6N043 979 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 ATL2Q8NHH9 583 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 NPY6RQ99463 290 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 CWH43Q9H720 699 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 ABI2Q9NYB9 513 aaPredicted RBP23.84■■□□□ 1.41
PTX3-201ENST00000295927 NAALADL1Q9UQQ1 740 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 MDM4O15151 490 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 CST8O60676 142 aa23.84■■□□□ 1.41
PTX3-201ENST00000295927 FAM153BP0C7A2 387 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms