RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 PPIL6Q8IXY8 311 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ACTL9Q8TC94 416 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 LRRN4Q8WUT4 740 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ATP2A3Q93084 1043 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 TMA16Q96EY4 203 aaKnown RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 BTBD9Q96Q07 612 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CDRT15Q96T59 188 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 C1orf112Q9NSG2 853 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 EBF1Q9UH73 591 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PCSK1NQ9UHG2 260 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 TCEAL9Q9UHQ7 104 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 BCORQ6W2J9 1755 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ROBO3Q96MS0 1386 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 WDR64B1ANS9 1081 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 MATN2O00339 956 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 GNPATO15228 680 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SLC16A4O15374 487 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SIN3BO75182 1162 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SLITRK3O94933 977 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 RPL7AP62424 266 aaKnown RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF543Q08ER8 600 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 LGSNQ5TDP6 509 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 EGFLAMQ63HQ2 1017 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 FRMD7Q6ZUT3 714 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 FBXO33Q7Z6M2 555 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SAPCD2Q86UD0 394 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CROCCP3Q8IVE0 287 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 BHLHE22Q8NFJ8 381 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 LMO3Q8TAP4 145 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PPP1R14BQ96C90 147 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CMTM5Q96DZ9 223 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 KCNK16Q96T55 309 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CCDC106Q9BWC9 280 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 C20orf27Q9GZN8 174 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 KLHL25Q9H0H3 589 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PNPOQ9NVS9 261 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SHOC2Q9UQ13 582 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 C1orf232A0A0U1RR37 186 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 FUOMA2VDF0 154 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 RGL2O15211 777 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A9O60656 530 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CST8O60676 142 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 NOL3O60936 208 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 EIF2AK2P19525 551 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 NUP107P57740 925 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CDKL1Q00532 357 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ABCB5Q2M3G0 1257 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 PDCD4Q53EL6 469 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 DCAF6Q58WW2 860 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 TMEM270Q6UE05 265 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 C14orf80Q86SX3 495 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF276Q8N554 614 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CXorf38Q8TB03 319 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 MCEEQ96PE7 176 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A7Q9HAW7 530 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A10Q9HAW8 530 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 UGT1A8Q9HAW9 530 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 F8VP50 259 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 KLHL2O95198 593 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 TNNI1P19237 187 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 PEX3P56589 373 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 SNAPC2Q13487 334 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CARTPTQ16568 116 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 TRIM16LQ309B1 348 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 LDLRAP1Q5SW96 308 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CIAPIN1Q6FI81 312 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 KYAT3Q6YP21 454 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ERI1Q8IV48 349 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 IGDCC3Q8IVU1 814 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 FBXW8Q8N3Y1 598 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 RSPH1Q8WYR4 309 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ATXN7L3BQ96GX2 97 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 PPP1R10Q96QC0 940 aaKnown RBP10.55□□□□□ -0.72
CLDN1-201ENST00000295522 ADA2Q9NZK5 511 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 CEPT1Q9Y6K0 416 aa10.55□□□□□ -0.72
CLDN1-201ENST00000295522 TMEM63AO94886 807 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 CFHP08603 1231 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 SNRPAP09012 282 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 KLF1Q13351 362 aaPredicted RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 FASTKD1Q53R41 847 aaKnown RBP10.54□□□□□ -0.72
CLDN1-201ENST00000295522 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
CLDN1-201ENST00000295522 GPR107Q5VW38 600 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms