RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 TEPSINQ96N21 525 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 GORASP1Q9BQQ3 440 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 CDO1Q16878 200 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 ZC2HC1CQ53FD0 456 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 NANOGNBQ7Z5D8 188 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 HPDLQ96IR7 371 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF512Q96ME7 567 aaPredicted RBP11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 CNGB3Q9NQW8 809 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 ASNSD1Q9NWL6 643 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 LMCD1Q9NZU5 365 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 RIPK3Q9Y572 518 aa11.79□□□□□ -0.52
NPC1L1-201ENST00000289547 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 M0R3G1 203 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 RTN2O75298 545 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CRYBB1P53674 252 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 RPL10AP62906 217 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 OASLQ15646 514 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TMTC4Q5T4D3 741 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 LMBRD2Q68DH5 695 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PRPF18Q99633 342 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 NT5C1AQ9BXI3 368 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TMEM8AQ9HCN3 771 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ACKR2O00590 384 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ICAM3P32942 547 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 EIF2B2P49770 351 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ADRM1Q16186 407 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TTC33Q6PID6 262 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 FAM43BQ6ZT52 329 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 C18orf8Q96DM3 657 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SH3GL2Q99962 352 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SLITRK3O94933 977 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PPM1AP35813 382 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PEX5P50542 639 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CDK17Q00537 523 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CTXN3Q4LDR2 81 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SLC51AQ86UW1 340 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TRAPPC9Q96Q05 1148 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TLR10Q9BXR5 811 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 STK33Q9BYT3 514 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PAIP1Q9H074 479 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SAGE1Q9NXZ1 904 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 SMIM35A0A1B0GVV1 85 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TLL1O43897 1013 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 HSPA1AP0DMV8 641 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 HSPA1BP0DMV9 641 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 COPAP53621 1224 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 PTPN11Q06124 597 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 HABP4Q5JVS0 413 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 KLHDC7AQ5VTJ3 777 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 C3orf62Q6ZUJ4 267 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ARL10Q8N8L6 244 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 ACTRT1Q8TDG2 376 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 TRAPPC12Q8WVT3 735 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 E2F7Q96AV8 911 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 NR1H4Q96RI1 486 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 FOXP3Q9BZS1 431 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CDC42EP4Q9H3Q1 356 aaKnown RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 C20orf96Q9NUD7 363 aaPredicted RBP11.78□□□□□ -0.52
NPC1L1-201ENST00000289547 CBX6O95503 412 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 PAX3P23760 479 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 SDC4P31431 198 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 PSMC6P62333 389 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 ATP1A4Q13733 1029 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 GRB14Q14449 540 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 ZPBP2Q6X784 338 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 TMC3Q7Z5M5 1100 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 ZNF786Q8N393 782 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 SYN2Q92777 582 aaPredicted RBP11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 EXT2Q93063 718 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 ZCWPW1Q9H0M4 648 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 PPCSQ9HAB8 311 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 CHST12Q9NRB3 414 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 SH3BP1Q9Y3L3 701 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.52
NPC1L1-201ENST00000289547 GOLGA8CPA6NN73 597 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 CYP26A1O43174 497 aa11.77□□□□□ -0.53
NPC1L1-201ENST00000289547 ADCY6O43306 1168 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms