RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CFAP97Q9P2B7 532 aa26.47■■□□□ 1.83
PDF-201ENST00000288022 DNAJC12Q9UKB3 198 aa26.47■■□□□ 1.83
PDF-201ENST00000288022 USP3Q9Y6I4 520 aa26.47■■□□□ 1.83
PDF-201ENST00000288022 ARSAP15289 507 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 TARSP26639 723 aaKnown RBP26.46■■□□□ 1.83
PDF-201ENST00000288022 CCDC105Q8IYK2 499 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 AOPEPQ8N6M6 819 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 MSANTD3Q96H12 275 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 KCNH6Q9H252 994 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 NMUR1Q9HB89 426 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 HPS4Q9NQG7 708 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 OSER1Q9NX31 292 aa26.46■■□□□ 1.83
PDF-201ENST00000288022 SPECC1L-ADORA2AF8WAN1 911 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 LETM1O95202 739 aaPredicted RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 RARGP13631 454 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 CDK11BP21127 795 aaKnown RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 ATP5C1P36542 298 aaKnown RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 PLA2G4AP47712 749 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 PSEN1P49768 467 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 NUBP1P53384 320 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 MLLT6P55198 1093 aaPredicted RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 RAB41Q5JT25 222 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 RALGPS2Q86X27 583 aaPredicted RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 SECISBP2LQ93073 1101 aaKnown RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 ATP2A3Q93084 1043 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 LSM14BQ9BX40 385 aaKnown RBP26.45■■□□□ 1.82
PDF-201ENST00000288022 OSBPL6Q9BZF3 934 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 ULBP1Q9BZM6 244 aa26.45■■□□□ 1.82
PDF-201ENST00000288022 ZNF318Q5VUA4 2279 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SHISA7A6NL88 538 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SCAMP3O14828 347 aaKnown RBP26.44■■□□□ 1.82
PDF-201ENST00000288022 NCAM2O15394 837 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 THAP12O43422 761 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 MED7O43513 233 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 TBX18O95935 607 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 ZBED1O96006 694 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 RALAP11233 206 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 GNA15P30679 374 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 CTHP32929 405 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 ADIGQ0VDE8 80 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 KCNMA1Q12791 1236 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 PKDCCQ504Y2 493 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 FKBP15Q5T1M5 1219 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 C1orf228Q6PIY5 440 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SCD5Q86SK9 330 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SIX6OS1Q8N1H7 587 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 ARHGAP18Q8N392 663 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 CPA6Q8N4T0 437 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 DTWD2Q8NBA8 298 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SHC3Q92529 594 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 CYLDQ9NQC7 956 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 AJAP1Q9UKB5 411 aaPredicted RBP26.44■■□□□ 1.82
PDF-201ENST00000288022 NUDT5Q9UKK9 219 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 SH3BP1Q9Y3L3 701 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 ZDBF2Q9HCK1 2354 aa26.44■■□□□ 1.82
PDF-201ENST00000288022 MIA3Q5JRA6 1907 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 BECN2A8MW95 431 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 GALR2O43603 387 aaPredicted RBP26.43■■□□□ 1.82
PDF-201ENST00000288022 IRF1P10914 325 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 LCP1P13796 627 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 RGS7P49802 495 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 C10orf120Q5SQS8 335 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 TADA2BQ86TJ2 420 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 PRSS33Q8NF86 280 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 KCTD13Q8WZ19 329 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 LINC00597Q9H2U6 94 aa26.43■■□□□ 1.82
PDF-201ENST00000288022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.43■■□□□ 1.82
PDF-201ENST00000288022 COPB1P53618 953 aaKnown RBP26.42■■□□□ 1.82
PDF-201ENST00000288022 RAPGEF1Q13905 1077 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 NCAPHQ15003 741 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 EML3Q32P44 896 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 SLC35F5Q8WV83 523 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 ZFRQ96KR1 1074 aaKnown RBP26.42■■□□□ 1.82
PDF-201ENST00000288022 ECT2Q9H8V3 914 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 ACP6Q9NPH0 428 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 CLIC5Q9NZA1 410 aa26.42■■□□□ 1.82
PDF-201ENST00000288022 SYCE3A1L190 88 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 OTOL1A6NHN0 477 aaPredicted RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 SLC9A3R1O14745 358 aaPredicted RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 YWHAGP61981 247 aaKnown RBP eCLIP26.41■■□□□ 1.82
PDF-201ENST00000288022 GOLGA8FQ08AF8 430 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 GOLGA8DPQ0D2H9 430 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 KLHDC7AQ5VTJ3 777 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 PMF1Q6P1K2 205 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 TXNDC11Q6PKC3 985 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 RSRC2Q7L4I2 434 aaKnown RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 ZNF606Q8WXB4 792 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 NDRG1Q92597 394 aaKnown RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 CDK5RAP1Q96SZ6 601 aaKnown RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 DLGAP2Q9P1A6 1054 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 LIMA1Q9UHB6 759 aaKnown RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 DNMT3LQ9UJW3 386 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 ARIH1Q9Y4X5 557 aaPredicted RBP26.41■■□□□ 1.82
PDF-201ENST00000288022 FHOD1Q9Y613 1164 aa26.41■■□□□ 1.82
PDF-201ENST00000288022 PIK3R2O00459 728 aa26.4■■□□□ 1.82
PDF-201ENST00000288022 MDM4O15151 490 aa26.4■■□□□ 1.82
PDF-201ENST00000288022 NFATC1O95644 943 aa26.4■■□□□ 1.82
PDF-201ENST00000288022 AMPD2Q01433 879 aa26.4■■□□□ 1.82
PDF-201ENST00000288022 PTK2Q05397 1052 aa26.4■■□□□ 1.82
PDF-201ENST00000288022 NR1H3Q13133 447 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms