RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 UBXN11Q5T124 520 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 DCAF12L1Q5VU92 463 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SLCO4C1Q6ZQN7 724 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NLRP10Q86W26 655 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SHCBP1Q8NEM2 672 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZMIZ2Q8NF64 920 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 EDARADDQ8WWZ3 215 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 WDR92Q96MX6 357 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GAD1Q99259 594 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SEZ6LQ9BYH1 1024 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TTYH3Q9C0H2 523 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 KIAA1683Q9H0B3 1180 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GHITMQ9H3K2 345 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SUGCTQ9HAC7 445 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZNF624Q9P2J8 865 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 MORF4L1Q9UBU8 362 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PLEKHM1Q9Y4G2 1056 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FAM169AQ9Y6X4 670 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 XIRP1Q702N8 1843 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 A0A1W2PQ45 241 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 A0A1W2PQY0 241 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SH3D21A4FU49 640 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FAM90A27PA6NNH2 459 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 H0Y858 1186 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 H7C4K7 107 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TSC22D2O75157 780 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PTP4A3O75365 173 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ERN1O75460 977 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RARGP13631 454 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PREPP48147 710 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZNF132P52740 706 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CAPZA1P52907 286 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CSE1LP55060 971 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 TMEM62Q0P6H9 643 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SNX1Q13596 522 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 FAM171A1Q5VUB5 890 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CATSPERGQ6ZRH7 1159 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 KCNK18Q7Z418 384 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PXKQ7Z7A4 578 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PRPF39Q86UA1 669 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 FBXO11Q86XK2 927 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 IRF2BP1Q8IU81 584 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GALNT11Q8NCW6 608 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 MOSPD2Q8NHP6 518 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 RASSF8Q8NHQ8 419 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SPATA18Q8TC71 538 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SPPL3Q8TCT6 385 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZNF480Q8WV37 535 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FAM120BQ96EK7 910 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RUFY1Q96T51 708 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 OSBPL1AQ9BXW6 950 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CHST8Q9H2A9 424 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TLR9Q9NR96 1032 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SIDT1Q9NXL6 827 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 KCNK4Q9NYG8 393 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 COL20A1Q9P218 1284 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 STK26Q9P289 416 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GMEB2Q9UKD1 530 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 STX8Q9UNK0 236 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 MTMR6Q9Y217 621 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D30Q9Y2I9 924 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZFP37Q9Y6Q3 630 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3DA0A087WVF3 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3IA0A087WXS9 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3EA0A087X179 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3KA0A087X1G2 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 A0A1W2PRV1 198 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3BA6NDS4 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3FA6NER0 549 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3LB9A6J9 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 KIAA0355O15063 1070 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CCNT1O60563 726 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 EXOC3O60645 756 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SGPL1O95470 568 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 RB1P06400 928 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3HP0C7X1 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 YBX3P16989 372 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD1-201ENST00000284049 MC4RP32245 332 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SOAT1P35610 550 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NT5C2P49902 561 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 STAT2P52630 851 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 UBE3CQ15386 1083 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TCP11X2Q5H9J9 407 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ADGRF1Q5T601 910 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3GQ6DHY5 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3CQ6IPX1 549 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 RASGRP2Q7LDG7 609 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D3Q8IZP1 549 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 OR7D4Q8NG98 312 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SEC14L1Q92503 715 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 KCNJ9Q92806 393 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 UBE2FQ969M7 185 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 VPS39Q96JC1 886 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CMTM3Q96MX0 182 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 HIST1H2AAQ96QV6 131 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SERHL2Q9H4I8 314 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 RGL1Q9NZL6 768 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 DKK3Q9UBP4 350 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PRSS50Q9UI38 385 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms