RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SDE2Q6IQ49 451 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 WDR59Q6PJI9 974 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 ANO5Q75V66 913 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 ETNPPLQ8TBG4 499 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 LZICQ8WZA0 190 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 IL17RAQ96F46 866 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 PGLYRP2Q96PD5 576 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 KCTD10Q9H3F6 313 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 COG4Q9H9E3 785 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 MICAL2O94851 1124 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 HMGCRP04035 888 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 DLG4P78352 724 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 ACTN3Q08043 901 aaPredicted RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 IL17AQ16552 155 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 ERMARDQ5T6L9 678 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 SLC15A5A6NIM6 579 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 NCAM2O15394 837 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 RHOCP08134 193 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 INPP1P49441 399 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 CCDC15Q0P6D6 951 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 TTLL9Q3SXZ7 439 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 GJC2Q5T442 439 aaPredicted RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 ZDHHC17Q8IUH5 632 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 DMAP1Q9NPF5 467 aaPredicted RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 RBM22Q9NW64 420 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 MTO1Q9Y2Z2 717 aaKnown RBP11.66□□□□□ -0.54
USP6NL-201ENST00000277575 PCDHB12Q9Y5F1 795 aa11.66□□□□□ -0.54
USP6NL-201ENST00000277575 MRC1P22897 1456 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 HEATR9A2RTY3 570 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TIMM44O43615 452 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 KLHL2O95198 593 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 PYGMP11217 842 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 IL10P22301 178 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 PTPN7P35236 360 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 CSE1LP55060 971 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 DENND1BQ6P3S1 775 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TBC1D19Q8N5T2 526 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TMA16Q96EY4 203 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 SMARCD1Q96GM5 515 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 PCDH9Q9HC56 1237 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TLR8Q9NR97 1041 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 RNF19AQ9NV58 838 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 ATRNO75882 1429 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 SPATA31C2B4DYI2 1134 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 KRT34O76011 436 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 FAM107AO95990 144 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 PGK1P00558 417 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 RAD23BP54727 409 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 SHROOM1Q2M3G4 852 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 MFSD7Q6UXD7 560 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 DEFB106AQ8N104 65 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 CARNMT1Q8N4J0 409 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 SENP8Q96LD8 212 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TRIM45Q9H8W5 580 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 TNFSF13BQ9Y275 285 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 MAFO75444 373 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 DNAL1Q4LDG9 190 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 UCMAQ8WVF2 138 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 MTBPQ96DY7 904 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 CELF6Q96J87 481 aaKnown RBP11.65□□□□□ -0.54
USP6NL-201ENST00000277575 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 NT5MQ9NPB1 228 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 UBP1Q9NZI7 540 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 AURKCQ9UQB9 309 aa11.65□□□□□ -0.54
USP6NL-201ENST00000277575 CBX4O00257 560 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 APOA4P06727 396 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.55
USP6NL-201ENST00000277575 STMN1P16949 149 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 KPNA1P52294 538 aaPredicted RBP11.65□□□□□ -0.55
USP6NL-201ENST00000277575 AGAP9Q5VTM2 703 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 PCYOX1LQ8NBM8 494 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 ELOVL4Q9GZR5 314 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 MRGBPQ9NV56 204 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 TMEM39AQ9NV64 488 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.55
USP6NL-201ENST00000277575 HES2Q9Y543 173 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 PCDHA3Q9Y5H8 950 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.55
USP6NL-201ENST00000277575 E5RJQ4 531 aa11.64□□□□□ -0.55
USP6NL-201ENST00000277575 AIM2O14862 343 aa11.64□□□□□ -0.55
USP6NL-201ENST00000277575 PLA2G6O60733 806 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms