RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TUBA3CQ13748 450 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 STILQ15468 1287 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ZBED5Q49AG3 693 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 SGO2Q562F6 1265 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 GLRX5Q86SX6 157 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ELMOD2Q8IZ81 293 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 TCP10LQ8TDR4 215 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 DPF3Q92784 378 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 MRRFQ96E11 262 aaKnown RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 NGLY1Q96IV0 654 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 COG8Q96MW5 612 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 VPS35Q96QK1 796 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 INO80BQ9C086 356 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ARMC1Q9NVT9 282 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 COG5Q9UP83 839 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ANGPTL3Q9Y5C1 460 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 GSTTP1A0A1W2PQM5 241 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 SYCE1LA8MT33 242 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 E5RJQ4 531 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 UBAP1LF5GYI3 381 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 CCRL2O00421 344 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 HOXC11O43248 304 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 KLHL2O95198 593 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 PLEKHA8P1O95397 391 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 GGPS1O95749 300 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 FOSL1P15407 271 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 PSMC3P17980 439 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 STAT3P40763 770 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 MAGEA4P43358 317 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 CDH15P55291 814 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 DGKDQ16760 1214 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 TCHHL1Q5QJ38 904 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 SCARA3Q6AZY7 606 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 TRIM59Q8IWR1 403 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ARHGEF26Q96DR7 871 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 FAM20AQ96MK3 541 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 TRIT1Q9H3H1 467 aaKnown RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 MAGEF1Q9HAY2 307 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 MOV10Q9HCE1 1003 aaKnown RBP9.56□□□□□ -0.88
PDGFC-201ENST00000274071 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 SLC17A7Q9P2U7 560 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ANAPC5Q9UJX4 755 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 PSMD13Q9UNM6 376 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 ST14Q9Y5Y6 855 aa9.56□□□□□ -0.88
PDGFC-201ENST00000274071 C1orf232A0A0U1RR37 186 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 H3BNH8 94 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 H7C0C1 242 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 GIPC1O14908 333 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 SEC24DO94855 1032 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 M6PRP20645 277 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 LLGL1Q15334 1064 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 PPP6R3Q5H9R7 873 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 UBE2UQ5VVX9 321 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 SUSD4Q5VX71 490 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 TUBA3EQ6PEY2 450 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 SLC13A5Q86YT5 568 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 HPS6Q86YV9 775 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 LNX1Q8TBB1 728 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 TP53INP1Q96A56 240 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 PGBD4Q96DM1 585 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 SLC29A1Q99808 456 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 STK39Q9UEW8 545 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 KCNN3Q9UGI6 736 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 CDH22Q9UJ99 828 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 TRAF6Q9Y4K3 522 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 GOLGA8MH3BSY2 632 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 TMEM253P0C7T8 217 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 AMPD3Q01432 767 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 PTK2BQ14289 1009 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 NFE2Q16621 373 aaPredicted RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 PGS1Q32NB8 556 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 AARS2Q5JTZ9 985 aaKnown RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 RARS2Q5T160 578 aaKnown RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 CHERPQ8IWX8 916 aaKnown RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 LINC00469Q8N7U9 141 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 C1orf54Q8WWF1 131 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 ZUFSPQ96AP4 578 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 AIFM2Q9BRQ8 373 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 LRRC19Q9H756 370 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 DNAJC18Q9H819 358 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 ACP6Q9NPH0 428 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 OLAHQ9NV23 265 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 DNMT3BQ9UBC3 853 aaKnown RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 KLQ9UEF7 1012 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 POLIQ9UNA4 740 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 NCANO14594 1321 aa9.55□□□□□ -0.88
PDGFC-201ENST00000274071 MYH14Q7Z406 1995 aaKnown RBP9.55□□□□□ -0.88
PDGFC-201ENST00000274071 DYNC1LI2O43237 492 aaPredicted RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 MSI1O43347 362 aaKnown RBP9.54□□□□□ -0.88
PDGFC-201ENST00000274071 JRKO75564 520 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 BMP10O95393 424 aa9.54□□□□□ -0.88
PDGFC-201ENST00000274071 VEGFAP15692 232 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms